Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 RNU6-525P-201ENST00000363685 104 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 RNU6-263P-201ENST00000363811 107 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 RNU6-730P-201ENST00000383954 104 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MIR607-201ENST00000385241 96 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 RNU6-1176P-201ENST00000390955 107 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 RNU4-78P-201ENST00000410940 126 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC007390.1-201ENST00000415722 356 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MTND2P16-201ENST00000419987 799 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MTCYBP31-201ENST00000438855 1122 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MTND2P39-201ENST00000457230 764 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC010468.1-201ENST00000461022 817 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC104982.1-201ENST00000478775 574 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 TMED11P-201ENST00000479478 690 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC069528.1-202ENST00000482888 637 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MTND3P3-201ENST00000505004 126 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MIR2276-201ENST00000516886 89 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 RN7SKP60-201ENST00000516985 239 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AP001189.2-201ENST00000527320 189 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MTCYBP41-201ENST00000528913 1123 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 OR5D17P-201ENST00000531492 978 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC004024.1-201ENST00000549244 247 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 TGIF1P1-201ENST00000558095 802 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MIR2682-201ENST00000580305 110 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC097504.2-201ENST00000608088 454 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC092954.1-201ENST00000609121 445 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 XIST_intron.1-201ENST00000619444 68 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC026422.1-201ENST00000623961 452 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 MTND4P9-201ENST00000507819 1346 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC091152.2-201ENST00000591628 2569 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 RPL17P50-201ENST00000396131 546 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AL024474.1-201ENST00000404655 591 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AL138880.1-201ENST00000405824 642 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 HSFY1P1-201ENST00000423928 1178 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 RAC1P8-201ENST00000427086 527 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC006548.1-201ENST00000427470 102 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 SEPT7P5-201ENST00000434048 306 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 ELOCP13-201ENST00000443934 329 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC092451.1-201ENST00000480211 153 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 RPS4XP22-201ENST00000480755 780 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC013828.1-201ENST00000481845 158 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC006445.1-201ENST00000491925 405 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 ARL2BPP6-201ENST00000512757 439 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 RNU6-276P-201ENST00000516114 96 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC027309.2-201ENST00000520566 192 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AP004371.1-201ENST00000525240 214 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC006518.1-201ENST00000541449 943 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AL160281.1-201ENST00000605307 311 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC024060.1-201ENST00000607052 494 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 RMST_8.1-201ENST00000610287 165 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms