Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 CYCSP49-201ENST00000420810 319 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 TPMTP1-201ENST00000592307 737 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AP004247.3-201ENST00000608682 624 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AL512643.1-201ENST00000635735 524 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 PHKBP1-201ENST00000450951 1951 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 MTND5P28-201ENST00000438005 1594 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 RNU1-17P-201ENST00000363022 152 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 SNORA62.2-201ENST00000364672 152 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 SAR1AP4-201ENST00000429225 591 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC098826.1-201ENST00000433943 471 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC007677.1-201ENST00000445757 515 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 RPL23AP70-201ENST00000483361 460 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 RNA5SP445-201ENST00000515889 115 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC132825.8-201ENST00000640783 297 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
PHRF1Q9P1Y6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 MTND5P29-201ENST00000458676 1807 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AC011460.1-201ENST00000636268 1834 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 MIR365B-201ENST00000362317 111 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 Y_RNA.118-201ENST00000363300 101 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AC013470.3-201ENST00000420252 1194 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 RPL36AP21-201ENST00000490372 323 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 VN1R7P-201ENST00000619242 903 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AP003499.2-201ENST00000624100 483 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 MIR21-201ENST00000362134 72 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 RPL23AP42-201ENST00000471152 471 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC026412.2-201ENST00000512270 1075 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC078814.3-201ENST00000553036 491 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC067852.7-201ENST00000623270 535 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC092447.7-201ENST00000422212 1621 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 RNU6-295P-201ENST00000516901 104 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 OR5D17P-201ENST00000531492 978 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 MIR4781-201ENST00000585250 76 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 AC023043.2-201ENST00000589678 1026 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 AC009570.1-201ENST00000609599 745 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 MIR219B-201ENST00000637023 88 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 U8.8-201ENST00000365399 135 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 Y_RNA.508-201ENST00000384502 114 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 RNU6-14P-201ENST00000384630 106 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC117522.2-201ENST00000510049 657 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 RPS27AP18-201ENST00000515536 459 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 VTA1P2-201ENST00000520205 911 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AL359893.1-201ENST00000447628 1580 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 DEFA7P-201ENST00000382676 285 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 MTCYBP14-201ENST00000457471 715 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms