Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
PHRF1Q9P1Y6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 CYCSP49-201ENST00000420810 319 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 TPMTP1-201ENST00000592307 737 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AP004247.3-201ENST00000608682 624 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AL512643.1-201ENST00000635735 524 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 PHKBP1-201ENST00000450951 1951 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 MTND5P28-201ENST00000438005 1594 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 RNU1-17P-201ENST00000363022 152 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 SNORA62.2-201ENST00000364672 152 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 SAR1AP4-201ENST00000429225 591 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC098826.1-201ENST00000433943 471 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC007677.1-201ENST00000445757 515 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 RPL23AP70-201ENST00000483361 460 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 RNA5SP445-201ENST00000515889 115 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 AC132825.8-201ENST00000640783 297 ntBASIC2.97□□□□□ -1.93
PHRF1Q9P1Y6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
PHRF1Q9P1Y6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 MTND5P29-201ENST00000458676 1807 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AC011460.1-201ENST00000636268 1834 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 MIR365B-201ENST00000362317 111 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 Y_RNA.118-201ENST00000363300 101 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AC013470.3-201ENST00000420252 1194 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 RPL36AP21-201ENST00000490372 323 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 VN1R7P-201ENST00000619242 903 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 AP003499.2-201ENST00000624100 483 ntBASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PHRF1Q9P1Y6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 MIR21-201ENST00000362134 72 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 RPL23AP42-201ENST00000471152 471 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC026412.2-201ENST00000512270 1075 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC078814.3-201ENST00000553036 491 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC067852.7-201ENST00000623270 535 ntBASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
PHRF1Q9P1Y6 AC092447.7-201ENST00000422212 1621 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 RNU6-295P-201ENST00000516901 104 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 OR5D17P-201ENST00000531492 978 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 MIR4781-201ENST00000585250 76 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 AC023043.2-201ENST00000589678 1026 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 AC009570.1-201ENST00000609599 745 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 MIR219B-201ENST00000637023 88 ntBASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PHRF1Q9P1Y6 U8.8-201ENST00000365399 135 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 Y_RNA.508-201ENST00000384502 114 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 RNU6-14P-201ENST00000384630 106 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC117522.2-201ENST00000510049 657 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 RPS27AP18-201ENST00000515536 459 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 VTA1P2-201ENST00000520205 911 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AL359893.1-201ENST00000447628 1580 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 DEFA7P-201ENST00000382676 285 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 MTCYBP14-201ENST00000457471 715 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms