Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 SDCBPP2-201ENST00000424643 885 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC091390.1-201ENST00000433904 331 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 BMS1P19-201ENST00000433925 393 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 KCTD10P1-201ENST00000434203 625 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 ATP5C1P1-201ENST00000441945 895 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 HSFY6P-201ENST00000445573 403 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 EEF1E1P1-201ENST00000446998 430 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 EPS15P1-201ENST00000448836 336 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 RPL26P28-201ENST00000451325 435 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 TRGVB-201ENST00000453257 471 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 NANOGP10-201ENST00000453325 895 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 RPL21P11-201ENST00000461458 483 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC004801.2-202ENST00000463559 283 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC022447.1-201ENST00000515358 464 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 SCARNA14-201ENST00000516903 136 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 ARL2BPP5-201ENST00000523141 481 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 DEFB131D-201ENST00000526803 184 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AL389895.1-201ENST00000554127 252 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 CYCSP2-201ENST00000558168 301 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC007224.1-201ENST00000564410 144 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC008507.1-201ENST00000587506 734 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC128687.1-201ENST00000605304 619 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 MIR7844-201ENST00000616161 122 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC009878.1-201ENST00000621819 340 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-156P-201ENST00000621869 107 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AC092656.1-203ENST00000624134 423 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 ZNF37BP-203ENST00000452306 1352 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 RNA5SP283-201ENST00000365604 119 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 OR5H15-201ENST00000383696 930 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-921P-201ENST00000384361 107 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-441P-201ENST00000384545 106 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 MIR184-201ENST00000384962 84 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-628P-201ENST00000410675 107 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 RPL23AP39-201ENST00000415533 405 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 CYCSP46-201ENST00000423569 204 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC092427.1-201ENST00000439177 601 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 MTCO1P48-201ENST00000448024 1096 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 HMGN3P1-201ENST00000453847 193 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 SNORD108-201ENST00000459332 71 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC092757.1-201ENST00000467293 467 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC106872.2-201ENST00000494303 480 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 FTH1P24-201ENST00000503502 462 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 MTATP6P22-201ENST00000507369 598 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC026784.1-201ENST00000507986 352 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 PCBP2P3-201ENST00000509726 843 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 FTH1P21-201ENST00000512179 511 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC108064.1-201ENST00000513791 460 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC239860.2-201ENST00000525886 270 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AGGF1P8-201ENST00000562979 1000 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 AGGF1P4-201ENST00000568249 801 ntBASIC3.89□□□□□ -1.79
SMARCAL1Q9NZC9 MIR4697-201ENST00000582977 78 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms