Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RPL7P38-201ENST00000488396 739 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 HMGB3P15-201ENST00000507326 574 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC117522.2-201ENST00000510049 657 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 MTCYBP37-201ENST00000510642 1133 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RNU6-232P-201ENST00000517144 64 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RNA5SP380-201ENST00000517190 98 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 MED28P5-201ENST00000528254 438 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC107982.3-201ENST00000584957 985 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC245297.2-201ENST00000610119 565 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC008083.4-201ENST00000615076 444 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 MIR6864-201ENST00000617935 70 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AL603755.1-201ENST00000619504 163 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.4□□□□□ -1.86
NDE1Q9NXR1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.4□□□□□ -1.86
NDE1Q9NXR1 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.86
NDE1Q9NXR1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
NDE1Q9NXR1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NDE1Q9NXR1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NDE1Q9NXR1 AL391994.1-201ENST00000254724 282 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MIR148B-201ENST00000362252 99 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 SNORA31-201ENST00000362607 130 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 RNU6-216P-201ENST00000363282 104 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 SNRPEP2-201ENST00000397592 279 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MIR1284-201ENST00000408337 120 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MIR1302-8-201ENST00000408342 128 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AL365338.1-201ENST00000422282 858 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 RPL18P10-201ENST00000425606 538 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 ISCA1P2-201ENST00000438679 421 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 SLC31A1P1-201ENST00000451221 567 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 OR6C5P-201ENST00000452388 923 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC092757.1-201ENST00000467293 467 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC026979.1-201ENST00000492525 396 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 Y_RNA.688-201ENST00000516565 95 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MTCO1P49-201ENST00000523429 802 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MTCO1P47-201ENST00000523889 1271 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 OR5AK1P-201ENST00000524837 922 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MTCYBP28-201ENST00000566728 1132 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC109446.2-201ENST00000567872 497 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC135628.1-201ENST00000568867 534 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC120057.2-201ENST00000571520 271 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AL358072.1-201ENST00000604156 575 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC092650.2-201ENST00000619984 902 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MIR7703-201ENST00000620784 77 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC004777.1-201ENST00000624317 287 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC073476.4-201ENST00000628409 72 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 OR8B1P-202ENST00000641132 1178 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 MTND5P24-201ENST00000438892 1767 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NDE1Q9NXR1 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.87
NDE1Q9NXR1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 SNRPEP3-201ENST00000338402 276 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 MIR649-201ENST00000384843 97 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 MIR591-201ENST00000385290 95 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 SNORA48.8-201ENST00000391324 134 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms