Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC007225.2-201ENST00000562529 256 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AL391358.1-201ENST00000605342 190 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 uc_338.32-201ENST00000615087 172 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC091905.1-201ENST00000624400 311 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 LRRC77P-213ENST00000637727 880 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 PABPC1P6-201ENST00000445594 1829 ntBASIC4.6□□□□□ -1.67
MKS1Q9NXB0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
MKS1Q9NXB0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 OR4K15-201ENST00000305051 1216 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RNU6-181P-201ENST00000363225 107 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RNU6-282P-201ENST00000365357 103 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RNY3P13-201ENST00000365542 102 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RNU6-637P-201ENST00000384050 107 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RNU1-44P-201ENST00000384453 163 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 MIR135A2-201ENST00000384854 100 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 MIR1183-201ENST00000408856 89 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RN7SKP177-201ENST00000410567 355 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL160275.2-201ENST00000412010 394 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL591848.1-201ENST00000413092 322 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RPS7P15-201ENST00000415804 584 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC079355.1-201ENST00000421770 223 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 USP9YP18-201ENST00000425912 695 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC073464.1-201ENST00000429823 534 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC093156.1-201ENST00000440382 670 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RPL38P1-201ENST00000460914 211 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RPS3AP14-201ENST00000483907 780 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC007182.2-201ENST00000489251 402 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RNU6-445P-201ENST00000516949 107 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL121603.1-201ENST00000553815 142 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 MIR4801-201ENST00000582704 82 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC068790.5-201ENST00000602741 355 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL512782.1-201ENST00000603093 364 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 XIAPP1-201ENST00000603162 600 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL590282.1-201ENST00000610379 1136 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 FAM27B-201ENST00000610601 213 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC024941.1-201ENST00000612250 334 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 MIR6862-1-201ENST00000613016 70 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 MIR6862-2-201ENST00000614755 70 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC090517.2-201ENST00000614966 680 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL359880.1-201ENST00000621879 266 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL645937.1-201ENST00000641739 1652 ntBASIC4.59□□□□□ -1.67
MKS1Q9NXB0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
MKS1Q9NXB0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
MKS1Q9NXB0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 SAMMSON-226ENST00000642089 1582 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 RN7SKP115-201ENST00000363177 317 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 RNU2-62P-201ENST00000410868 191 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC099677.1-201ENST00000420575 175 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC069157.1-201ENST00000421749 137 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 TIMM9P3-201ENST00000428659 274 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 RPL35AP22-201ENST00000436855 335 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.58□□□□□ -1.68
MKS1Q9NXB0 AC003071.1-201ENST00000451219 789 ntBASIC4.58□□□□□ -1.68
MKS1Q9NXB0 ISCUP1-201ENST00000454451 448 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms