Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC024341.1-201ENST00000526444 1552 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 API5P2-201ENST00000397055 1498 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 DBF4P1-201ENST00000412976 1892 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 OR5H2-201ENST00000355273 945 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RNU6-251P-201ENST00000363235 104 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RNU6-839P-201ENST00000363347 108 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RNU6-354P-201ENST00000383862 107 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RNU6-610P-201ENST00000384264 107 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RAB28P1-201ENST00000411517 641 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AL136133.1-201ENST00000413694 376 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC092447.6-201ENST00000414578 210 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RPS29P4-201ENST00000414733 161 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AL451074.5-201ENST00000415894 435 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 UBE2D3P3-201ENST00000426992 425 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC012497.1-201ENST00000429392 575 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 MTCYBP34-201ENST00000439552 670 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AL133547.1-201ENST00000448546 220 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AL445669.2-201ENST00000454425 421 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC091860.1-201ENST00000505723 432 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RNU6-27P-201ENST00000516146 107 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RNU6-334P-201ENST00000517072 102 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 HIGD1AP5-201ENST00000529959 259 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC018630.1-201ENST00000541376 925 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 RPL21P12-201ENST00000559810 515 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 ZNF415P1-201ENST00000582279 1166 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC012669.1-201ENST00000603209 283 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AP005229.2-201ENST00000609980 697 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC019176.2-201ENST00000611579 315 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 AC015967.1-201ENST00000619893 476 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 Z99129.2-201ENST00000619967 314 ntBASIC2.77□□□□□ -1.97
CLN6Q9NWW5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.77□□□□□ -1.97
CLN6Q9NWW5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 GDI2P1-201ENST00000429312 1336 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 FAM35CP-201ENST00000554755 2470 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 RNA5SP50-201ENST00000363731 107 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 SNORA51.6-201ENST00000384151 125 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 SNORD15B-201ENST00000384714 146 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 CYCSP45-201ENST00000402289 315 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 RPL7P25-201ENST00000404151 721 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AL133264.1-201ENST00000407157 562 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 RN7SKP202-201ENST00000410439 330 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 OR1AA1P-201ENST00000419597 916 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC018644.1-201ENST00000429934 551 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC241584.1-201ENST00000438469 1241 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 SEPT14P24-201ENST00000447236 180 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 BTF3P5-201ENST00000457252 467 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 RPS17P11-201ENST00000474297 293 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 RPL23AP11-201ENST00000475260 469 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 ERHP1-201ENST00000523006 310 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC008127.2-201ENST00000549925 1075 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC090666.1-201ENST00000578241 445 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 FAM60BP-201ENST00000578364 658 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC006504.3-201ENST00000586818 523 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AP001542.2-201ENST00000593141 364 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC069234.5-201ENST00000611056 416 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC008083.4-201ENST00000615076 444 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AC006111.3-201ENST00000622137 383 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AL049781.1-201ENST00000623195 3585 ntBASIC2.76□□□□□ -1.97
CLN6Q9NWW5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AP002907.1-201ENST00000606361 1430 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms