Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.59□□□□□ -1.67
CCM2LQ9NUG4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCM2LQ9NUG4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.59□□□□□ -1.68
CCM2LQ9NUG4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCM2LQ9NUG4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 MAPK10-303ENST00000641324 3959 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 NXPH1-205ENST00000602349 1953 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AL356489.2-201ENST00000566968 3528 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AL445487.1-201ENST00000415694 1580 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 RNY4P14-201ENST00000363656 96 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 RNU6-108P-201ENST00000365558 107 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 Y_RNA.453-201ENST00000384223 109 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 Y_RNA.481-201ENST00000384373 102 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 RNU6-456P-201ENST00000384493 107 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 Y_RNA.573-201ENST00000384763 105 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 RNU6-278P-201ENST00000390945 109 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 MIR921-201ENST00000401133 56 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 HDGFP1-201ENST00000405943 252 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 RN7SKP285-201ENST00000410137 318 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 ELOCP14-201ENST00000428070 331 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 GPR143P-201ENST00000434155 205 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 ELOCP7-201ENST00000439968 331 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 MTATP6P23-201ENST00000440153 476 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AL353572.1-201ENST00000442490 417 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC011753.3-201ENST00000443436 406 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 H2AFZP5-201ENST00000446960 382 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AL354714.3-201ENST00000447284 493 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 IGLV2-34-201ENST00000490007 283 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 PRDX4P1-201ENST00000507189 574 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC109635.3-201ENST00000529536 185 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AL133271.1-201ENST00000538229 291 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 RPS3AP4-201ENST00000555161 764 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 RPL26P30-202ENST00000602923 645 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC090948.1-201ENST00000607464 549 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC006338.1-201ENST00000618453 749 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC139792.3-201ENST00000623525 224 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 AC105074.1-201ENST00000623380 3095 ntBASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.58□□□□□ -1.68
CCM2LQ9NUG4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 OR1S2-201ENST00000302592 978 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RNU6-1097P-201ENST00000363586 107 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RNVU1-6-201ENST00000364688 164 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RNU6-637P-201ENST00000384050 107 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RNU6-432P-201ENST00000384196 109 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RN7SKP114-201ENST00000410327 279 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RNU6-712P-201ENST00000410558 100 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 GJA6P-201ENST00000415117 1042 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 BEND7P1-201ENST00000422058 457 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 OR4K11P-201ENST00000431829 904 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC104651.2-201ENST00000447549 528 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RPL23AP20-201ENST00000447965 421 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC092647.2-201ENST00000452998 253 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 NANOGP10-201ENST00000453325 895 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC022364.2-201ENST00000457963 554 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC093278.1-201ENST00000494700 600 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC020893.1-201ENST00000502452 580 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC010350.1-201ENST00000504908 231 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC116353.2-201ENST00000505332 712 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 Y_RNA.693-201ENST00000516641 110 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 RNU6-410P-201ENST00000517006 107 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.57□□□□□ -1.68
CCM2LQ9NUG4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms