Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC004062.1-201ENST00000509926 645 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC021146.1-201ENST00000511202 716 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 BNIP3P5-201ENST00000562290 498 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 PCMTD1P2-201ENST00000565017 355 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 MIR3186-201ENST00000577404 85 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 AC112187.2-201ENST00000604345 283 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 TUG1_1.1-201ENST00000610654 145 ntBASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CHMP1AQ9HD42 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 CR381670.1-201ENST00000624291 1693 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 PABPC1P9-201ENST00000426076 1612 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 SNORA51.2-201ENST00000364595 132 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 U8.14-201ENST00000390843 143 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL021407.1-201ENST00000404531 386 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC109780.2-201ENST00000413467 845 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL139095.3-201ENST00000419672 1203 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL590762.4-201ENST00000425885 253 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 MTCO1P39-201ENST00000426148 480 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 RPL21P66-201ENST00000426566 466 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC087650.1-201ENST00000431445 468 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC011742.1-201ENST00000431448 434 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL772161.1-201ENST00000439130 476 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 RPL7P36-201ENST00000444633 681 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 GDI2P2-201ENST00000445131 608 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC073264.2-201ENST00000448886 166 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC007967.1-201ENST00000455422 1159 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC078785.3-201ENST00000476607 425 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC034222.1-201ENST00000494052 532 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 NDUFA5P12-201ENST00000503796 343 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC006499.5-201ENST00000505037 514 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC010342.1-201ENST00000514047 877 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC091489.2-201ENST00000566263 604 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 MIR4480-201ENST00000582492 71 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC007687.1-201ENST00000602704 304 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC006254.3-201ENST00000603353 884 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC011451.2-201ENST00000604303 598 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL022161.1-201ENST00000604390 213 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AL360181.4-201ENST00000621752 134 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 MIR6719-201ENST00000622428 87 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC091965.5-201ENST00000624785 342 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 CCT4P2-201ENST00000233836 1548 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 ZNF833P-201ENST00000424938 1494 ntBASIC3.53□□□□□ -1.84
CHMP1AQ9HD42 AC073429.2-201ENST00000569694 1444 ntBASIC3.53□□□□□ -1.85
CHMP1AQ9HD42 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 GABPAP-201ENST00000419271 1356 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 RNU6-114P-201ENST00000384704 105 ntBASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CHMP1AQ9HD42 RNU6-882P-201ENST00000391025 103 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms