Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL589823.1-201ENST00000429577 183 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC244035.1-201ENST00000430042 390 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 TAF9P1-201ENST00000445421 515 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC006480.1-201ENST00000449887 378 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 TAF9P2-201ENST00000454958 515 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 MEMO1P3-201ENST00000459811 302 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC097493.1-201ENST00000463958 372 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 RPL30P9-201ENST00000465586 330 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 RN7SL132P-201ENST00000478131 296 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 HMGB1P21-201ENST00000502313 581 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 RNA5SP164-201ENST00000516533 110 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 HIGD1AP10-201ENST00000527837 282 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 ZNF705CP-201ENST00000530515 889 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 CYCSP30-201ENST00000546447 172 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 MAGOH2P-202ENST00000584384 429 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL031985.2-201ENST00000600955 480 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC113194.1-201ENST00000606037 500 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 SNORA62.6-201ENST00000606322 83 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL031775.1-201ENST00000607014 887 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC106028.5-201ENST00000610332 395 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC068722.2-201ENST00000618734 544 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AL354798.1-201ENST00000622505 329 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 FP236240.3-201ENST00000623061 327 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 DCAF13P1-201ENST00000495256 1330 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 MTND5P28-201ENST00000438005 1594 ntBASIC3.88□□□□□ -1.79
PCDH9Q9HC56 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH9Q9HC56 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC066616.2-201ENST00000559334 1481 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 U3.4-201ENST00000363352 213 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RNU6-1243P-201ENST00000364028 107 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RNU6-283P-201ENST00000364788 107 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC016769.3-201ENST00000396562 315 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 EIF5P1-201ENST00000400019 1231 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 SNORA3.3-201ENST00000408712 125 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RNU2-21P-201ENST00000410368 188 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RHEBP3-201ENST00000411920 351 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AL133384.1-201ENST00000412744 351 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC004987.3-201ENST00000413879 771 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RPS15AP40-201ENST00000419621 391 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 ZYG11AP1-201ENST00000430329 837 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 MTND4P6-201ENST00000438297 472 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RPS29P7-201ENST00000439662 171 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AL136126.1-201ENST00000473603 402 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RAP1BP2-201ENST00000478270 544 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AL139099.1-201ENST00000497398 403 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 NDUFB4P9-201ENST00000511646 388 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 Y_RNA.695-201ENST00000516715 107 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RNU6-352P-201ENST00000516908 107 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC060788.1-201ENST00000521318 469 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC022695.1-201ENST00000522089 237 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 GTF2IP22-201ENST00000554443 182 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC103987.3-201ENST00000582071 292 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 KLKP1-201ENST00000595979 403 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RNU6-88P-201ENST00000606801 100 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC107214.2-201ENST00000608204 634 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 U6.101-201ENST00000637707 76 ntBASIC3.87□□□□□ -1.79
PCDH9Q9HC56 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH9Q9HC56 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms