Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 OR4C10P-201ENST00000434991 931 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC023141.8-201ENST00000442554 208 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 NUTF2P3-201ENST00000448540 384 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AL031274.1-201ENST00000450334 232 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 RPL21P8-201ENST00000465083 535 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC009127.1-201ENST00000467090 155 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC117503.1-201ENST00000472241 394 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC068305.1-201ENST00000497406 726 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 RNU6-488P-201ENST00000515918 99 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC034114.1-201ENST00000520293 285 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 CBX3P8-201ENST00000532412 525 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC133555.2-201ENST00000550213 292 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 MIR4643-201ENST00000577473 78 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC024220.1-201ENST00000603675 484 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 U2.17-201ENST00000611454 95 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC109583.2-201ENST00000617367 129 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC074101.1-201ENST00000637861 241 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 NAMPTP1-201ENST00000440465 2514 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 SNURFL-201ENST00000309296 343 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 RNU6-858P-201ENST00000362436 107 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 Y_RNA.399-201ENST00000383955 105 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 U3.22-201ENST00000391120 215 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC016769.3-201ENST00000396562 315 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 RPL30P2-201ENST00000414021 291 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC091390.3-201ENST00000426478 338 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 RPL23AP25-201ENST00000430973 463 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AL445305.1-201ENST00000432577 575 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 snoU13.24-201ENST00000458998 104 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC087884.1-201ENST00000469738 328 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC109925.1-201ENST00000478069 331 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC091167.1-201ENST00000492017 396 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 RNU7-4P-201ENST00000516961 62 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 RNU6-323P-201ENST00000521915 107 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 HSPE1P2-201ENST00000554777 306 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC106782.4-201ENST00000568264 210 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 RPS29P30-201ENST00000600975 111 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC011921.3-201ENST00000605540 361 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
COL25A1Q9BXS0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 AC022893.2-201ENST00000564832 3296 ntBASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 TCP11X1-202ENST00000622971 1372 ntBASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 snoU2_19.2-201ENST00000363024 80 ntBASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 RNU6-215P-201ENST00000365169 102 ntBASIC5.73□□□□□ -1.49
COL25A1Q9BXS0 SNORA51.6-201ENST00000384151 125 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms