Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC010486.1-201ENST00000511793 424 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 RN7SKP132-201ENST00000516001 208 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 RNU2-58P-201ENST00000516403 183 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC103783.1-201ENST00000520506 373 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 ZNF192P1-203ENST00000565888 810 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC083760.1-201ENST00000589621 670 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC012119.1-201ENST00000603184 222 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 YWHAQP7-201ENST00000603536 658 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC021851.1-201ENST00000608537 1082 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 VN1R9P-201ENST00000614184 867 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 MIR6715A-201ENST00000615929 79 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AL356118.1-201ENST00000635272 1078 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 AC011978.2-201ENST00000569835 2054 ntBASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RPAP1Q9BWH6 SNORA51.4-201ENST00000364993 124 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AL139413.1-201ENST00000421309 217 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 OOSP1P1-201ENST00000423265 274 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 DUTP6-201ENST00000425573 462 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 DPPA2P1-201ENST00000428060 556 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 Z77249.1-201ENST00000444622 1175 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 HMGN2P21-201ENST00000447764 270 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 MTND3P24-201ENST00000506306 329 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC093755.1-201ENST00000512950 1023 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AF279873.1-201ENST00000523393 313 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AP000916.1-201ENST00000533869 835 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 OR6C73P-201ENST00000546432 358 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC112503.2-201ENST00000609005 552 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 ASNSP3-201ENST00000451989 1306 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 MTND5P28-201ENST00000438005 1594 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 SNORA18.3-201ENST00000384122 132 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 RNU6-481P-201ENST00000384194 107 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 DSTNP4-201ENST00000399472 474 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 ATP5F1P6-201ENST00000402768 767 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 RN7SKP123-201ENST00000410732 291 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 CKS1BP5-201ENST00000434172 273 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC112653.1-201ENST00000443851 386 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 RPL7P55-201ENST00000450522 746 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 SLC31A1P1-201ENST00000451221 567 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC078817.1-201ENST00000492623 435 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC016065.2-201ENST00000514530 444 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AP003717.3-201ENST00000544832 1180 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 CYCSP39-201ENST00000565821 309 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC006270.2-201ENST00000578523 652 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC015871.2-201ENST00000603605 948 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 BNIP3P4-201ENST00000604946 565 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 AC022079.2-201ENST00000619739 566 ntBASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.51□□□□□ -1.85
RPAP1Q9BWH6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 MTND5P3-201ENST00000438536 1800 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 RNA5SP432-201ENST00000362480 116 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 RNU6-1243P-201ENST00000364028 107 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AL445529.1-201ENST00000398713 389 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AL590004.2-201ENST00000404787 371 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AL451074.5-201ENST00000415894 435 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AL606495.1-201ENST00000422100 813 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 AC022018.1-201ENST00000430685 241 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 HMGB1P45-201ENST00000435986 653 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 NPM1P13-201ENST00000452663 865 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 BX248409.1-201ENST00000455497 255 ntBASIC3.5□□□□□ -1.85
RPAP1Q9BWH6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms