Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 MIR26A1-201ENST00000362205 77 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 MIR422A-201ENST00000362286 90 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 MIR23B-201ENST00000384832 97 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 MIR512-1-201ENST00000384913 84 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 RNA5SP181-201ENST00000410246 98 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL024507.1-201ENST00000412741 274 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL137014.1-201ENST00000420490 1226 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC073508.1-201ENST00000428866 656 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL513175.1-201ENST00000431492 780 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 MTCYBP34-201ENST00000439552 670 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC135721.1-201ENST00000497954 479 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 VN1R104P-201ENST00000505115 1009 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 RN7SKP57-201ENST00000517248 293 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 IGKV2D-36-201ENST00000518643 226 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 HPRT1P3-201ENST00000539521 576 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC010620.2-201ENST00000600135 313 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 SRGNP1-201ENST00000603392 451 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL137843.1-201ENST00000605078 385 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC009570.1-201ENST00000609599 745 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 MIR6076-201ENST00000617521 113 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC244100.1-202ENST00000621554 382 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC139713.2-210ENST00000641741 992 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AC135776.4-201ENST00000624300 1904 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 RPL9P7-201ENST00000330965 580 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC073325.2-201ENST00000339545 159 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AL512633.1-201ENST00000399931 655 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 RPL7P37-201ENST00000425095 738 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 MORF4L1P7-201ENST00000426038 703 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AL445528.1-201ENST00000426330 420 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC005300.1-201ENST00000428401 373 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AL512649.1-201ENST00000428997 581 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 RPL7P29-201ENST00000437151 728 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 Z75741.1-201ENST00000446793 314 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AL162389.1-201ENST00000449233 177 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 PLGLA-201ENST00000465668 449 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC117440.1-201ENST00000474107 571 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 RNF138P1-201ENST00000502765 546 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 RAC1P5-201ENST00000512182 576 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 SCGB1D5P-201ENST00000515134 247 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 SNORA31.8-201ENST00000516327 108 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC009812.2-201ENST00000517657 457 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 NOP56P3-201ENST00000549457 385 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 CR383656.14-201ENST00000551951 406 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AL391156.1-201ENST00000554965 554 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 MIR4429-201ENST00000580105 73 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 MIR5694-201ENST00000581190 76 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC008277.2-201ENST00000605196 797 ntBASIC1.69□□□□□ -2.14
LIMD2Q9BT23 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms