Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC092376.2-201ENST00000622621 4116 ntBASIC5.5□□□□□ -1.53
TRIM56Q9BRZ2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC121333.1-201ENST00000567488 2709 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 Y_RNA.112-201ENST00000363250 102 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 RNU1-146P-201ENST00000364015 165 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-308P-201ENST00000390957 107 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 CISD1P1-201ENST00000393907 327 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 Y_RNA.605-201ENST00000410577 105 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC068533.1-201ENST00000418542 415 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 REREP1Y-201ENST00000422655 198 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 RPL30P3-201ENST00000424262 333 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC008065.1-201ENST00000428525 348 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AF228730.2-201ENST00000438784 848 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 REREP2Y-201ENST00000439103 200 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 HMGB3P11-201ENST00000440127 604 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC016696.1-201ENST00000446949 318 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 BX276092.4-201ENST00000452056 248 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 SIAH1P1-201ENST00000479411 923 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AL135752.1-201ENST00000479477 471 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC068305.1-201ENST00000497406 726 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AP000763.2-201ENST00000540641 163 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 SETP7-201ENST00000552169 453 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AL117187.1-201ENST00000555482 181 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC051619.2-201ENST00000559063 397 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC005341.1-201ENST00000571086 708 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 MIR4790-201ENST00000577799 79 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 RN7SL290P-201ENST00000578661 300 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 MIR3149-201ENST00000584629 83 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 BNIP3P25-201ENST00000596023 559 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 VN1R107P-201ENST00000601784 209 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 RN7SL787P-201ENST00000613000 284 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AP001486.3-201ENST00000615334 372 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 RMST_9.1-201ENST00000619945 193 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 SMG1P6-201ENST00000532337 2930 ntBASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM56Q9BRZ2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AL450345.1-202ENST00000605741 3881 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-179P-201ENST00000363350 107 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-1078P-201ENST00000364522 103 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 Y_RNA.452-201ENST00000384202 108 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 RPS12P5-201ENST00000423449 371 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 PRPF38AP2-201ENST00000438179 851 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 HMGB3P22-202ENST00000451823 572 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 RPL36AP13-201ENST00000457490 317 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC020893.1-201ENST00000502452 580 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 PTP4A1P4-201ENST00000512479 322 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 RN7SKP24-201ENST00000515888 284 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-566P-201ENST00000516790 107 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 IMMP1LP2-201ENST00000552954 492 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 SNORD95-201ENST00000579879 68 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 MIR4503-201ENST00000582187 83 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AP000654.2-201ENST00000605633 586 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 AC244107.2-201ENST00000611773 76 ntBASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM56Q9BRZ2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms