Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 SNORA40.2-201ENST00000390847 128 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC110754.1-201ENST00000399740 601 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 SSXP10-201ENST00000402595 565 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AL121978.1-201ENST00000402778 359 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 RN7SKP58-201ENST00000411010 305 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 RPL31P2-201ENST00000413849 377 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 LUZP4P1-201ENST00000415420 344 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 OR4K6P-201ENST00000416478 897 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 BX842559.1-201ENST00000419615 532 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC096632.1-201ENST00000427395 310 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC108734.1-201ENST00000439549 399 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AL590399.6-201ENST00000446396 307 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC091179.1-201ENST00000461606 579 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC098862.1-201ENST00000504991 413 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 EEF1A1P37-201ENST00000522748 715 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 MTCO1P49-201ENST00000523429 802 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AP001317.1-201ENST00000531194 960 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 LRRC6P1-201ENST00000532188 885 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC092470.1-201ENST00000546187 132 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 MTCYBP23-201ENST00000558717 1102 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC093519.1-201ENST00000566109 298 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 MTND3P13-201ENST00000574391 343 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC015688.2-201ENST00000584523 262 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC007566.2-201ENST00000603642 413 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC009464.1-201ENST00000615731 469 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC243312.2-201ENST00000623340 601 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 AC084035.1-201ENST00000634543 607 ntBASIC3.03□□□□□ -1.92
EBF4Q9BQW3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
EBF4Q9BQW3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.03□□□□□ -1.93
EBF4Q9BQW3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
EBF4Q9BQW3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 RNU6-374P-201ENST00000364146 108 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 SNORA70.2-201ENST00000364506 135 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 snoZ40.1-201ENST00000364540 72 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 RNA5SP189-201ENST00000364920 115 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AF228730.1-201ENST00000397972 663 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 RPL31P1-201ENST00000398116 372 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AL355379.1-201ENST00000405542 640 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 DPPA2P1-201ENST00000428060 556 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 GTF2IP7-202ENST00000436677 309 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC079203.1-201ENST00000487972 404 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 RNF138P1-201ENST00000502765 546 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 MTND4LP22-201ENST00000508209 276 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 OR10V3P-201ENST00000525712 725 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 CENPUP2-201ENST00000555897 1186 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 MIR3922-201ENST00000585192 84 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 VN1R83P-201ENST00000595685 445 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 GAS5-AS1-201ENST00000602767 694 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC012119.1-201ENST00000603184 222 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 RPP40P2-201ENST00000603596 712 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC121761.2-201ENST00000617300 689 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AC048344.4-201ENST00000619744 527 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 AL392088.2-201ENST00000637607 285 ntBASIC3.02□□□□□ -1.93
EBF4Q9BQW3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
EBF4Q9BQW3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 RN7SKP280-201ENST00000364196 304 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 Y_RNA.408-201ENST00000383987 102 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 SNORD116-12-201ENST00000384468 92 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms