Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 RNU6-937P-201ENST00000384325 106 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AF186996.5-201ENST00000418098 904 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 REREP1Y-201ENST00000422655 198 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC245884.2-201ENST00000426257 404 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 BX323845.3-201ENST00000428215 527 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC087650.1-201ENST00000431445 468 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AL590128.1-201ENST00000433407 286 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 REREP2Y-201ENST00000439103 200 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC073587.1-201ENST00000447093 876 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 RPL23AP28-201ENST00000448062 470 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 RNU7-87P-201ENST00000459343 62 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 RN7SL643P-201ENST00000471845 291 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 PPIAP19-201ENST00000486414 492 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 RNU1-86P-201ENST00000516108 154 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 RNU1-107P-201ENST00000516617 154 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 RNU6-840P-201ENST00000517275 65 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC018552.1-201ENST00000562099 811 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AL035410.2-201ENST00000604963 864 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC114477.1-201ENST00000605097 605 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC004241.2-201ENST00000614562 444 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 AL590240.4-201ENST00000616908 390 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 MIR4275-201ENST00000636486 87 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC068769.1-201ENST00000474767 2426 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC007685.1-201ENST00000329806 452 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 SNORD50.1-201ENST00000362987 71 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 SNORA38B-201ENST00000363524 131 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 RNA5SP140-201ENST00000364524 92 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 Y_RNA.292-201ENST00000364904 97 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 RPL21P67-201ENST00000402896 478 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 RPL19P1-201ENST00000411635 428 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 AL096701.2-201ENST00000416920 238 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 ELOCP18-201ENST00000434209 337 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC005165.2-201ENST00000466070 380 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 RPS18P6-201ENST00000476880 458 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 RN7SL259P-201ENST00000478499 253 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 RN7SL649P-201ENST00000496974 275 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC005519.1-201ENST00000554490 601 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 MIR212-201ENST00000586026 110 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC104465.1-201ENST00000611365 139 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC116447.1-201ENST00000613153 453 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC240442.1-201ENST00000616055 283 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 RMST_4.1-201ENST00000616886 107 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 SNORA16A-202ENST00000628458 135 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
USB1Q9BQ65 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USB1Q9BQ65 AC009779.8-201ENST00000641684 4384 ntBASIC5.88□□□□□ -1.47
USB1Q9BQ65 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
USB1Q9BQ65 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.87□□□□□ -1.47
USB1Q9BQ65 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.87□□□□□ -1.47
USB1Q9BQ65 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.87□□□□□ -1.47
USB1Q9BQ65 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USB1Q9BQ65 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.87□□□□□ -1.47
USB1Q9BQ65 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.87□□□□□ -1.47
USB1Q9BQ65 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms