Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MTND4LP7-201ENST00000431728 294 ntBASIC2.83□□□□□ -1.96
VAT1Q99536 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.83□□□□□ -1.96
VAT1Q99536 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.83□□□□□ -1.96
VAT1Q99536 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.83□□□□□ -1.96
VAT1Q99536 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.83□□□□□ -1.96
VAT1Q99536 AP001025.2-201ENST00000490908 477 ntBASIC2.83□□□□□ -1.96
VAT1Q99536 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.83□□□□□ -1.96
VAT1Q99536 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.83□□□□□ -1.96
VAT1Q99536 AL355836.1-201ENST00000555951 870 ntBASIC2.83□□□□□ -1.96
VAT1Q99536 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.83□□□□□ -1.96
VAT1Q99536 AP001033.2-201ENST00000609701 1003 ntBASIC2.83□□□□□ -1.96
VAT1Q99536 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.83□□□□□ -1.96
VAT1Q99536 AL390240.1-201ENST00000612950 384 ntBASIC2.83□□□□□ -1.96
VAT1Q99536 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.83□□□□□ -1.96
VAT1Q99536 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.83□□□□□ -1.96
VAT1Q99536 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.83□□□□□ -1.96
VAT1Q99536 MTND5P11-201ENST00000511037 1812 ntBASIC2.83□□□□□ -1.96
VAT1Q99536 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.83□□□□□ -1.96
VAT1Q99536 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 SNORA44-201ENST00000384584 132 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AL031121.1-201ENST00000406553 254 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC008280.1-201ENST00000418851 412 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC007000.2-201ENST00000442564 487 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC011825.1-201ENST00000484967 388 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 HIGD1AP13-201ENST00000509878 289 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC104108.1-201ENST00000509930 412 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC091826.1-201ENST00000514065 313 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 RNU1-61P-201ENST00000516107 151 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 SNORA31.26-201ENST00000517250 137 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.82□□□□□ -1.96
VAT1Q99536 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.82□□□□□ -1.96
VAT1Q99536 AC113192.3-201ENST00000529152 742 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC004217.3-201ENST00000551552 878 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.82□□□□□ -1.96
VAT1Q99536 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.82□□□□□ -1.96
VAT1Q99536 MTCO3P24-201ENST00000572729 782 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 AC012254.4-201ENST00000588843 273 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 KATNBL1P1-201ENST00000605192 748 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC005046.1-201ENST00000608515 625 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.82□□□□□ -1.96
VAT1Q99536 AC069234.5-201ENST00000611056 416 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.82□□□□□ -1.96
VAT1Q99536 AC073569.3-201ENST00000619055 682 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 AC073348.1-201ENST00000623002 331 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VAT1Q99536 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.82□□□□□ -1.96
VAT1Q99536 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VAT1Q99536 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
VAT1Q99536 AL356057.1-202ENST00000402263 756 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 UBE2V1P11-201ENST00000411559 285 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 RAD23BP2-201ENST00000416003 1207 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VAT1Q99536 HSFY1P1-201ENST00000423928 1178 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.81□□□□□ -1.96
VAT1Q99536 RABEPKP1-201ENST00000440529 1026 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 AL513321.1-201ENST00000441175 761 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 RPS3AP12-201ENST00000443616 753 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.81□□□□□ -1.96
VAT1Q99536 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VAT1Q99536 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.81□□□□□ -1.96
VAT1Q99536 RNA5SP468-201ENST00000516782 93 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 SNORA70.24-201ENST00000517233 118 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 AP003385.6-201ENST00000531603 374 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.81□□□□□ -1.96
VAT1Q99536 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.81□□□□□ -1.96
VAT1Q99536 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.81□□□□□ -1.96
VAT1Q99536 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.81□□□□□ -1.96
VAT1Q99536 ATP5F1P7-201ENST00000567330 760 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.81□□□□□ -1.96
VAT1Q99536 CR381653.2-201ENST00000624041 768 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 AC068620.4-201ENST00000636730 1182 ntBASIC2.81□□□□□ -1.96
VAT1Q99536 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
VAT1Q99536 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.81□□□□□ -1.96
VAT1Q99536 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VAT1Q99536 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
VAT1Q99536 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.81□□□□□ -1.96
VAT1Q99536 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VAT1Q99536 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
VAT1Q99536 AC004925.1-201ENST00000624256 2706 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VAT1Q99536 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.8□□□□□ -1.96
VAT1Q99536 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VAT1Q99536 RNU6-50P-201ENST00000362356 103 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 U8.9-201ENST00000365667 134 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.8□□□□□ -1.96
VAT1Q99536 RNU6-339P-201ENST00000384310 107 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 RNU6-441P-201ENST00000384545 106 ntBASIC2.8□□□□□ -1.96
VAT1Q99536 RNU6-796P-201ENST00000391086 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms