Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 AL445264.1-201ENST00000621719 171 ntBASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 AC011944.2-201ENST00000624440 683 ntBASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 MIR7641-1-201ENST00000627518 61 ntBASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RAB3IPQ96QF0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 RNA5SP383-201ENST00000362934 120 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 Y_RNA.234-201ENST00000364409 97 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 Y_RNA.548-201ENST00000384656 105 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AL136372.1-201ENST00000403060 228 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 RNU2-43P-201ENST00000410306 190 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 RNU6-757P-201ENST00000410334 100 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC109780.2-201ENST00000413467 845 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 MTCYBP38-201ENST00000417160 1123 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 THAP5P1-201ENST00000439089 262 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 CBX1P1-201ENST00000440184 427 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 CR769776.1-201ENST00000441254 787 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AL121871.1-201ENST00000443413 436 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC006463.2-201ENST00000473326 348 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AL132838.2-201ENST00000492041 314 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC093840.1-201ENST00000511599 336 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AP000926.4-201ENST00000527351 454 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC009643.1-201ENST00000532030 391 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 MIR4277-201ENST00000578298 84 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC006254.3-201ENST00000603353 884 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 ZNF876P-202ENST00000398732 1485 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RAB3IPQ96QF0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 TAB3P1-202ENST00000452645 1634 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 MTND5P27-201ENST00000428871 1720 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 RNU6-289P-201ENST00000364093 107 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 RNA5SP42-201ENST00000364278 115 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC011933.1-201ENST00000413334 321 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC006960.1-201ENST00000419980 153 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC024082.2-201ENST00000434771 238 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 RPS3AP54-201ENST00000435535 734 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 RPL23AP22-201ENST00000437556 453 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 FTH1P1-201ENST00000437933 532 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 MTCYBP34-201ENST00000439552 670 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 MTND1P31-201ENST00000449206 961 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 RPS11P1-201ENST00000451072 473 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC234775.1-201ENST00000454247 670 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC116533.1-201ENST00000459748 321 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 RN7SL303P-201ENST00000469773 251 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC012181.1-201ENST00000479895 423 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC114967.1-201ENST00000504890 259 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC020699.1-201ENST00000505161 445 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC104090.1-201ENST00000506341 1171 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 RAB9BP1-201ENST00000519581 626 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 COX6CP8-201ENST00000522620 226 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 AP001804.3-201ENST00000525146 880 ntBASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RAB3IPQ96QF0 HSPE1P5-201ENST00000561489 272 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms