Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RNU6-342P-201ENST00000384521 104 ntBASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 AL121594.1-201ENST00000475906 575 ntBASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 RPL9P33-201ENST00000484311 566 ntBASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 AL163540.1-201ENST00000485382 386 ntBASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 AC103968.1-201ENST00000557841 573 ntBASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 AP006248.2-201ENST00000623309 592 ntBASIC1.87□□□□□ -2.11
CSMD1Q96PZ7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 AC026523.2-201ENST00000625039 7739 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 FRG1BP-201ENST00000278882 761 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 RNU6-707P-201ENST00000364647 95 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 FAT1P1-201ENST00000406588 507 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 RPL23AP48-201ENST00000406913 488 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 AC002553.2-201ENST00000453217 340 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 MTND2P29-201ENST00000438595 412 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 RPL21P71-201ENST00000465598 459 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 AC104090.1-201ENST00000506341 1171 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 RNA5SP476-201ENST00000516613 103 ntBASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CSMD1Q96PZ7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 RPL38P4-201ENST00000502376 214 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 AC006971.1-201ENST00000407916 4486 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 AL162578.1-201ENST00000406202 378 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 POU5F1P7-201ENST00000508759 541 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 MIR6895-201ENST00000613497 78 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 Y_RNA.68-201ENST00000362881 102 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 RNA5SP210-201ENST00000391034 120 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 OR4K11P-201ENST00000431829 904 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 MIR5002-201ENST00000584713 97 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 AC245517.5-201ENST00000611529 162 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 MIR7153-201ENST00000637758 57 ntBASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.85□□□□□ -2.11
CSMD1Q96PZ7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 RNA5SP37-201ENST00000365420 130 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 RNU4-62P-201ENST00000410125 130 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC009237.2-201ENST00000421358 284 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 MTND4LP16-201ENST00000440828 295 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC123904.3-201ENST00000547218 814 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 PSMA3P-201ENST00000555485 635 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AL391813.2-201ENST00000609113 322 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC025048.6-202ENST00000627667 438 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC008432.1-201ENST00000615912 1320 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC006378.2-201ENST00000623178 2476 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 RNU6-356P-201ENST00000384140 107 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 SNORA11.4-201ENST00000408823 129 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 RPS29P12-201ENST00000460178 152 ntBASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.84□□□□□ -2.11
CSMD1Q96PZ7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 AC012498.1-201ENST00000424037 437 ntBASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 AC010546.1-201ENST00000569391 485 ntBASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 MIR6504-201ENST00000613520 61 ntBASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CSMD1Q96PZ7 RNU1-91P-201ENST00000364746 163 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms