Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC009303.3-201ENST00000591103 736 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 RPL23AP92-201ENST00000603609 255 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 HSPE1P7-201ENST00000604681 321 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC005046.1-201ENST00000608515 625 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC135803.1-201ENST00000608748 565 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC245517.5-201ENST00000611529 162 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC034102.8-201ENST00000615146 484 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AL590410.1-201ENST00000617925 333 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 AC015967.1-201ENST00000619893 476 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
AP1S3Q96PC3 MTND5P28-201ENST00000438005 1594 ntBASIC2.02□□□□□ -2.09
AP1S3Q96PC3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 RNU6-374P-201ENST00000364146 108 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 SNORA67.1-201ENST00000364749 141 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 SNORA1.3-201ENST00000384676 136 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC007064.1-201ENST00000412238 351 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC005300.1-201ENST00000428401 373 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC073508.1-201ENST00000428866 656 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 SUMO1P4-201ENST00000429430 302 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC091390.1-201ENST00000433904 331 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC025768.1-201ENST00000510057 267 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC008885.1-201ENST00000514930 301 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 CR383656.14-201ENST00000551951 406 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 ELOCP35-201ENST00000604289 336 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AL354950.1-201ENST00000614150 568 ntBASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.01□□□□□ -2.09
AP1S3Q96PC3 AL512283.1-201ENST00000606756 1384 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2□□□□□ -2.09
AP1S3Q96PC3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
AP1S3Q96PC3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
AP1S3Q96PC3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2□□□□□ -2.09
AP1S3Q96PC3 RPS20P25-201ENST00000412447 352 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2□□□□□ -2.09
AP1S3Q96PC3 AL356320.2-201ENST00000417263 507 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 RPL36AP36-201ENST00000418616 301 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC069157.1-201ENST00000421749 137 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 GCA-203ENST00000429691 824 ntTSL 3 BASIC2□□□□□ -2.09
AP1S3Q96PC3 AL050321.1-201ENST00000432363 400 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2□□□□□ -2.09
AP1S3Q96PC3 AL359073.1-201ENST00000448036 403 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2□□□□□ -2.09
AP1S3Q96PC3 RPL23AP70-201ENST00000483361 460 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC006445.1-201ENST00000491925 405 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 VN1R104P-201ENST00000505115 1009 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC114322.1-201ENST00000506771 926 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 SNORA31.8-201ENST00000516327 108 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 RN7SKP57-201ENST00000517248 293 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2□□□□□ -2.09
AP1S3Q96PC3 AC087808.1-201ENST00000520501 361 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2□□□□□ -2.09
AP1S3Q96PC3 PSMA2P1-201ENST00000526365 646 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2□□□□□ -2.09
AP1S3Q96PC3 EIF4EP5-201ENST00000528228 640 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2□□□□□ -2.09
AP1S3Q96PC3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2□□□□□ -2.09
AP1S3Q96PC3 OR7K1P-201ENST00000546439 926 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2□□□□□ -2.09
AP1S3Q96PC3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2□□□□□ -2.09
AP1S3Q96PC3 AL049870.4-201ENST00000555741 486 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 MTCYBP28-201ENST00000566728 1132 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC090751.1-201ENST00000566966 267 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
AP1S3Q96PC3 MIR7112-201ENST00000616126 65 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2□□□□□ -2.09
AP1S3Q96PC3 AC026422.1-201ENST00000623961 452 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AC034229.5-201ENST00000624258 185 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2□□□□□ -2.09
AP1S3Q96PC3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2□□□□□ -2.09
AP1S3Q96PC3 U6.105-201ENST00000637379 88 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
AP1S3Q96PC3 Z82209.1-201ENST00000422141 2135 ntBASIC2□□□□□ -2.09
AP1S3Q96PC3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
AP1S3Q96PC3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
AP1S3Q96PC3 RNU6-673P-201ENST00000365084 104 ntBASIC1.99□□□□□ -2.09
AP1S3Q96PC3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
AP1S3Q96PC3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
AP1S3Q96PC3 RNU6-98P-201ENST00000384173 107 ntBASIC1.99□□□□□ -2.09
AP1S3Q96PC3 RNU6-1072P-201ENST00000384703 107 ntBASIC1.99□□□□□ -2.09
AP1S3Q96PC3 RNU6-443P-201ENST00000384780 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms