Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FCF1P2-201ENST00000415284 583 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 SEPT14P24-201ENST00000447236 180 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 HMGB1P15-201ENST00000453854 435 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC017015.1-201ENST00000477387 286 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 RPS4XP22-201ENST00000480755 780 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC091860.1-201ENST00000505723 432 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC093510.2-201ENST00000562820 896 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC034268.2-201ENST00000571784 482 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC012493.2-201ENST00000595083 291 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 DPRXP5-201ENST00000604662 539 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC078880.5-201ENST00000617845 421 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.27□□□□□ -1.89
RPRD1AQ96P16 MTND2P41-201ENST00000637599 773 ntBASIC3.27□□□□□ -1.89
RPRD1AQ96P16 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RNU6-549P-201ENST00000384433 107 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RPS3AP26-201ENST00000398259 784 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AL031121.1-201ENST00000406553 254 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RNA5SP31-201ENST00000411144 127 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RNU2-72P-201ENST00000411175 163 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RNA5SP107-201ENST00000411358 122 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RPL7P46-201ENST00000425129 740 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RPS6P14-201ENST00000425165 719 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RPL21P40-201ENST00000428586 483 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC005345.1-201ENST00000431868 217 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 TRBV26-201ENST00000456572 344 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RPS3AP43-201ENST00000479743 781 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 RNA5SP135-201ENST00000517019 125 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 ZNF971P-201ENST00000562068 1249 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 GAS5-AS1-201ENST00000602767 694 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 AC092474.3-201ENST00000603022 568 ntBASIC3.26□□□□□ -1.89
RPRD1AQ96P16 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RPRD1AQ96P16 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 RNU6-821P-201ENST00000390995 107 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 RPL5P18-201ENST00000406671 891 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC092638.1-201ENST00000411966 1275 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC007899.1-201ENST00000412776 775 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 RPL23AP22-201ENST00000437556 453 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 ISCA1P2-201ENST00000438679 421 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 RPL17P49-201ENST00000443728 411 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC108078.3-201ENST00000502633 489 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 ZNF705CP-201ENST00000530515 889 ntBASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.25□□□□□ -1.89
RPRD1AQ96P16 UBL5P2-201ENST00000583788 219 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms