Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC010975.3-201ENST00000618727 978 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC022960.3-201ENST00000619794 441 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC006111.3-201ENST00000622137 383 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC090617.7-201ENST00000623952 126 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AL392088.2-201ENST00000637607 285 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 MFSD8-245ENST00000641743 948 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC00477Q96M19 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LINC00477Q96M19 ZNF807-201ENST00000328088 1707 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC00477Q96M19 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 ELL2P4-201ENST00000446870 1376 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC046144.1-201ENST00000478559 1853 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AL359893.1-201ENST00000447628 1580 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 SNORA14A-201ENST00000364773 135 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 OR52E6-202ENST00000379946 954 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 RNA5SP293-201ENST00000410527 113 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 VN1R51P-201ENST00000411675 945 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 SSR1P2-201ENST00000415208 787 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC106883.1-201ENST00000418805 562 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 ATG3P1-201ENST00000419507 911 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 MTCO2P17-201ENST00000424336 677 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC092648.1-201ENST00000425870 423 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC005345.1-201ENST00000431868 217 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 RPL23AP22-201ENST00000437556 453 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 RPL23AP76-201ENST00000441860 458 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 RPS26P56-201ENST00000444468 240 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC017015.1-201ENST00000477387 286 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC104619.4-201ENST00000510773 249 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 RNA5SP217-201ENST00000515959 91 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 RN7SKP31-201ENST00000516354 278 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 RN7SKP21-201ENST00000516503 220 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 IGKV2D-36-201ENST00000518643 226 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC084824.1-201ENST00000550917 1005 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 MTCYBP28-201ENST00000566728 1132 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 MTND1P8-201ENST00000571424 950 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC005412.1-201ENST00000580812 1049 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 MIR4697-201ENST00000582977 78 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 OR4G1P-201ENST00000588632 938 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC067852.3-201ENST00000589177 561 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 DUXAP4-201ENST00000603046 613 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AL450336.1-201ENST00000605180 586 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC092354.2-201ENST00000607786 514 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC092106.3-201ENST00000611308 722 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AL591516.1-201ENST00000611326 274 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 AL138478.1-201ENST00000612252 832 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 AC090772.4-201ENST00000623599 362 ntBASIC2.5□□□□□ -2.01
LINC00477Q96M19 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LINC00477Q96M19 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LINC00477Q96M19 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC00477Q96M19 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC00477Q96M19 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC00477Q96M19 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC00477Q96M19 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 RNA5SP197-201ENST00000363357 119 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 SNORD56.3-201ENST00000363507 71 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC00477Q96M19 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AL133264.1-201ENST00000407157 562 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AL450338.1-201ENST00000407987 512 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms