Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AKR1B10P1-201ENST00000425765 942 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 RPS11P7-201ENST00000442125 465 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 RN7SL585P-201ENST00000470538 280 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC091874.1-201ENST00000511402 339 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 RNU2-12P-201ENST00000517216 168 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 MIR5705-201ENST00000579870 89 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 MIR378D2-201ENST00000580636 98 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 AC127070.3-201ENST00000503695 3263 ntBASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
MS4A3Q96HJ5 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.36
MS4A3Q96HJ5 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC114774.1-201ENST00000507410 1770 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 Y_RNA.179-201ENST00000363844 90 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 SNORA36C-201ENST00000384289 132 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 SNORD12C-201ENST00000386307 89 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 RNU6-788P-201ENST00000390967 104 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 SNORA40C-201ENST00000391285 128 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 RN7SKP53-201ENST00000411337 315 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC096649.2-201ENST00000416186 393 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC008753.1-201ENST00000423096 284 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 CYCSP6-201ENST00000434498 302 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 CYCSP12-201ENST00000437729 300 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 RN7SL228P-201ENST00000470060 303 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC100832.1-201ENST00000471945 383 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 RN7SL153P-201ENST00000486501 292 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 OR5AH1P-201ENST00000595968 283 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 SCARNA4-202ENST00000625402 129 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AL596275.2-206ENST00000641957 626 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC122713.2-201ENST00000624942 3335 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC112243.1-201ENST00000623949 3851 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC007406.5-201ENST00000570140 3170 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 AC062022.1-201ENST00000451026 1684 ntBASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
MS4A3Q96HJ5 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 RNU6-166P-201ENST00000384371 107 ntBASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 RNA5SP475-201ENST00000410568 110 ntBASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 AC244452.1-201ENST00000413798 141 ntBASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 AC073261.1-201ENST00000429409 121 ntBASIC6.51□□□□□ -1.37
MS4A3Q96HJ5 DEFA11P-201ENST00000446470 261 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms