Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RAC1P7-201ENST00000445367 377 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 OR6K5P-201ENST00000447050 945 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RPS23P3-201ENST00000470993 430 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC017015.1-201ENST00000477387 286 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RNU6-714P-201ENST00000516963 103 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AP005205.1-201ENST00000563503 508 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 OR4K8P-201ENST00000578842 1048 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 KPNA2P3-201ENST00000584190 848 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC092106.3-201ENST00000611308 722 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AL590099.1-201ENST00000615276 138 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 MIR6130-201ENST00000619419 109 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC002550.2-201ENST00000621246 394 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC091152.2-201ENST00000591628 2569 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AL513185.3-201ENST00000433335 1300 ntBASIC3.63□□□□□ -1.83
VPS33AQ96AX1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS33AQ96AX1 AC073429.2-201ENST00000569694 1444 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RNA5SP443-201ENST00000363083 132 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RNU1-32P-201ENST00000363937 159 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RN7SKP285-201ENST00000410137 318 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RPL18P10-201ENST00000425606 538 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 MTND1P31-201ENST00000449206 961 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC010655.1-201ENST00000449336 292 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 ANKRD26P4-201ENST00000455755 950 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 SNORD121B-201ENST00000458838 81 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RPS27AP1-201ENST00000475545 471 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RPS4XP15-201ENST00000489210 795 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC093281.2-201ENST00000510153 597 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC110760.3-202ENST00000515177 371 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RNU6-528P-201ENST00000516926 100 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC239860.2-201ENST00000525886 270 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC013444.2-201ENST00000603317 787 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC090186.1-201ENST00000605991 572 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 OR52H1-202ENST00000641796 1061 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 PWAR6-201ENST00000552334 4618 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 RLIMP1-201ENST00000339626 1680 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 AC092447.10-201ENST00000620607 1652 ntBASIC3.62□□□□□ -1.83
VPS33AQ96AX1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS33AQ96AX1 ZNF807-201ENST00000328088 1707 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 RNU6-462P-201ENST00000362659 105 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 SNORA4.1-201ENST00000364263 144 ntBASIC3.61□□□□□ -1.83
VPS33AQ96AX1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VPS33AQ96AX1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms