Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC016588.2-201ENST00000632484 3021 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HPS3Q969F9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 RNU6-989P-201ENST00000362756 107 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 RNU6-359P-201ENST00000365466 108 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 SNORD115.1-201ENST00000391109 76 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AL359704.1-201ENST00000411586 781 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.68□□□□□ -1.66
HPS3Q969F9 RPL36AP36-201ENST00000418616 301 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 RPS12P23-201ENST00000419579 400 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC006548.1-201ENST00000427470 102 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 UBE2V1P13-201ENST00000436983 439 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC091862.1-201ENST00000438016 1100 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AL512326.1-201ENST00000443050 721 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 RPL23AP81-201ENST00000455252 467 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC103987.1-201ENST00000473394 348 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 S100A11P1-201ENST00000477525 312 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 RPS29P19-201ENST00000479709 171 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC008958.1-201ENST00000511047 682 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.68□□□□□ -1.66
HPS3Q969F9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.68□□□□□ -1.66
HPS3Q969F9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC137800.2-201ENST00000574375 120 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 ZNF415P1-201ENST00000582279 1166 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC091805.2-201ENST00000603848 235 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AL136363.2-201ENST00000604173 851 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 NDUFA8P1-201ENST00000605525 367 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 RNA5SP108-201ENST00000605921 117 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC006566.1-201ENST00000608943 513 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC114781.5-201ENST00000615297 108 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC104010.1-201ENST00000616889 150 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 AC099842.1-201ENST00000619919 596 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 CR381572.1-201ENST00000625098 102 ntBASIC4.68□□□□□ -1.66
HPS3Q969F9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HPS3Q969F9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HPS3Q969F9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AC092125.1-201ENST00000562568 1995 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HPS3Q969F9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS3Q969F9 ZNF962P-201ENST00000443465 3140 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HPS3Q969F9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS3Q969F9 FRG1BP-201ENST00000278882 761 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 RNA5SP52-201ENST00000362448 134 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HPS3Q969F9 RNU6-348P-201ENST00000384386 107 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 RNU6-837P-201ENST00000391056 108 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 RNU4-25P-201ENST00000410569 230 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AL031779.1-201ENST00000415663 330 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC245052.5-201ENST00000416320 649 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC127526.1-201ENST00000417526 366 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 USP9YP14-201ENST00000430663 563 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AL353691.1-201ENST00000451332 387 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS3Q969F9 ACTR3P3-201ENST00000480448 893 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC021382.1-201ENST00000483523 359 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC093840.1-201ENST00000511599 336 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS3Q969F9 RNU4-60P-201ENST00000517239 135 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.67□□□□□ -1.66
HPS3Q969F9 OR5M7P-201ENST00000526140 972 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS3Q969F9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AC069240.1-201ENST00000548774 375 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 CYP4A43P-201ENST00000568156 121 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 MIR4528-201ENST00000577763 90 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 MTND1P15-201ENST00000579262 949 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC015871.2-201ENST00000603605 948 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC080078.2-201ENST00000603766 501 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC109347.2-201ENST00000610220 349 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS3Q969F9 Z99129.1-201ENST00000612510 255 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms