Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR124-3-201ENST00000384866 87 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MIR195-201ENST00000385194 87 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MIR1179-201ENST00000408703 91 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 RNU4-78P-201ENST00000410940 126 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AL161631.1-201ENST00000417933 486 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 OR5BE1P-201ENST00000425977 939 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC018644.1-201ENST00000429934 551 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 FAM103A2P-201ENST00000444122 354 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 DNAJC19P1-201ENST00000455312 319 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MTCO1P42-201ENST00000457379 726 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 SNORD108-201ENST00000459332 71 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 RPL5P30-201ENST00000465511 891 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC104164.2-201ENST00000496953 495 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AF131216.2-201ENST00000512316 564 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MTCO2P32-201ENST00000514865 403 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 OR4R3P-201ENST00000525084 838 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MTND4LP18-201ENST00000526864 291 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AP002748.2-201ENST00000528671 348 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AP002963.1-201ENST00000530590 184 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 RFPL1S-203ENST00000539579 330 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC005255.1-201ENST00000593748 216 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AL365503.1-201ENST00000605247 905 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC010678.1-201ENST00000614118 713 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MIR6075-201ENST00000620782 95 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 AC039056.2-201ENST00000622261 511 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 CRYM-AS1-204ENST00000637983 556 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 OR5BE1P-202ENST00000641168 1176 ntBASIC4.17□□□□□ -1.74
HMGB4Q8WW32 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB4Q8WW32 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RNY4P24-201ENST00000362735 96 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RNU6-853P-201ENST00000364306 107 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RNU6-359P-201ENST00000365466 108 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RNU6-1207P-201ENST00000384343 107 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RNU6-809P-201ENST00000384461 107 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AL356583.2-201ENST00000426536 280 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 DLGAP5P1-201ENST00000430307 464 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RPS4XP4-201ENST00000443195 763 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 snoU13.22-201ENST00000459428 104 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RPL23AP2-201ENST00000471227 466 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC006390.1-201ENST00000508068 283 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC079140.3-201ENST00000511111 550 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC008694.2-201ENST00000517591 306 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 SETP7-201ENST00000552169 453 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 MIR3611-201ENST00000584484 83 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC008759.1-201ENST00000589783 983 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 IGHV3-29-201ENST00000604817 344 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC012557.2-201ENST00000605919 418 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC091965.4-201ENST00000607691 587 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC103591.3-201ENST00000608684 209 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 MIR7151-201ENST00000617477 60 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms