Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RNU5F-7P-201ENST00000363696 115 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RNA5SP88-201ENST00000365560 109 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-483P-201ENST00000384088 108 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-146P-201ENST00000384602 108 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 MIR606-201ENST00000384851 96 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 MIR195-201ENST00000385194 87 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-628P-201ENST00000410675 107 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 VDAC1P9-201ENST00000412766 841 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC009237.10-201ENST00000414112 510 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 HMGB1P45-201ENST00000435986 653 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 UBE2FP3-201ENST00000436366 524 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AL031663.1-201ENST00000437445 219 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC002542.1-201ENST00000440683 193 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC097499.1-201ENST00000444277 208 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 YWHAQP9-201ENST00000445891 512 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 ABCF2P2-201ENST00000450549 296 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC105914.1-201ENST00000511798 226 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC078814.3-201ENST00000553036 491 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC020661.2-201ENST00000560114 134 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC107954.1-201ENST00000565906 727 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 MIR1254-2-201ENST00000579553 63 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 AL158196.1-201ENST00000616786 434 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 CRYM-AS1-204ENST00000637983 556 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 DDX18P3-201ENST00000404856 2007 ntBASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.01□□□□□ -1.61
SH3RF3Q8TEJ3 Z95327.2-201ENST00000414579 1873 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 ASNSP1-201ENST00000518311 1939 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 OR11H4-201ENST00000315409 1082 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 SNORD56.2-201ENST00000363242 71 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 Y_RNA.144-201ENST00000363521 113 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RNU5E-5P-201ENST00000365379 116 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RNA5SP22-201ENST00000365393 109 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-877P-201ENST00000383868 107 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 MT-TR-201ENST00000387439 65 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 ENSAP1-201ENST00000392855 326 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AL389915.1-201ENST00000422463 466 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 GPM6BP2-201ENST00000432046 144 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC108059.2-201ENST00000434626 151 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 TRAPPC2P8-201ENST00000440676 396 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 HMGB3P9-201ENST00000441799 583 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RPL21P89-201ENST00000444021 467 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 GPM6BP1-201ENST00000446387 144 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 PTMAP3-201ENST00000447474 330 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RPL23AP65-201ENST00000475608 468 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 GAPDHP39-201ENST00000481866 979 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RN7SL604P-201ENST00000492589 296 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 NACA-211ENST00000548563 827 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms