Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AP000907.4-201ENST00000604143 237 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 AC107304.1-201ENST00000604229 296 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 AL121757.2-201ENST00000611223 313 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 Six3os1_4.1-201ENST00000615706 324 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 AC080038.2-201ENST00000617734 423 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 LARS-216ENST00000618084 720 ntTSL 5 BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 AL354751.3-201ENST00000618526 1027 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 KRTAP9-1-203ENST00000634358 330 ntTSL 5 BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 AC012507.4-201ENST00000637275 504 ntTSL 3 BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 ESR1-214ENST00000638569 132 ntTSL 5 BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 AC078776.2-201ENST00000641021 285 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 AC002543.1-201ENST00000299783 1954 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.25□□□□□ -1.89
SVIPQ8NHG7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SVIPQ8NHG7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RNU1-47P-201ENST00000362966 163 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 SNORA71D-201ENST00000363484 134 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 SNORD113-7-201ENST00000363762 77 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RNU6-105P-201ENST00000363909 104 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 U3.22-201ENST00000391120 215 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 FXNP2-201ENST00000411625 547 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RPL31P12-201ENST00000422587 358 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC009362.1-201ENST00000427253 406 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RPL30P4-201ENST00000429309 333 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 NDUFA5P4-201ENST00000436704 385 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 COQ5-202ENST00000445328 992 ntTSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AL390026.1-201ENST00000456647 457 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC073594.1-201ENST00000462065 364 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 HMGN2P26-201ENST00000463169 339 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC087884.1-201ENST00000469738 328 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RPL7P43-201ENST00000478876 753 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC083904.1-201ENST00000487828 231 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RN7SL285P-201ENST00000496478 264 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 TRBVA-201ENST00000498804 316 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RNA5SP143-201ENST00000516936 115 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC007536.1-201ENST00000533382 349 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC078814.4-201ENST00000546650 327 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 THAP2-202ENST00000547843 672 ntTSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC120114.5-201ENST00000562285 556 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 KIR3DP1-201ENST00000580853 628 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC090897.2-201ENST00000581715 130 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RN7SL178P-201ENST00000582930 304 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 SRP68P1-201ENST00000584247 269 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 TDGF1P7-201ENST00000593394 559 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 ZNF83-213ENST00000598536 522 ntTSL 4 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC011894.1-201ENST00000603255 456 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC140113.1-201ENST00000603467 169 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 RNU1-30P-201ENST00000606575 163 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 MIR8079-201ENST00000610873 72 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 DUXAP10-206ENST00000614614 712 ntTSL 3 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 uc_338.15-201ENST00000615470 191 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC007014.2-201ENST00000615581 479 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC027348.1-201ENST00000615979 615 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC002553.4-201ENST00000616896 331 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AP003062.2-201ENST00000624288 1117 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC245166.3-201ENST00000636897 257 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AL672167.1-203ENST00000641299 2975 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 AC135776.4-201ENST00000624300 1904 ntBASIC3.24□□□□□ -1.89
SVIPQ8NHG7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SVIPQ8NHG7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms