Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MIR613-201ENST00000385248 95 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 SNORA81-201ENST00000408493 178 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RNA5SP344-201ENST00000411081 104 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 FCF1P1-201ENST00000432690 571 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC011242.1-201ENST00000433596 1158 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RN7SL283P-201ENST00000489055 303 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RNA5SP320-201ENST00000516263 124 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MAGOH2P-202ENST00000584384 429 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AL161912.3-201ENST00000605404 628 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 VN1R9P-201ENST00000614184 867 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC008264.2-201ENST00000610193 3731 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 SNORD62.1-201ENST00000362541 86 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 Y_RNA.62-201ENST00000362840 99 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MTCYBP29-201ENST00000436327 1006 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC126182.1-201ENST00000478134 357 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 OR8L1P-201ENST00000534005 955 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 NDUFA5P6-201ENST00000542110 379 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MIR3199-1-201ENST00000582434 88 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 SNORA25.9-201ENST00000365087 128 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 YPEL5P1-201ENST00000419731 367 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RN7SKP43-201ENST00000516173 320 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC012182.1-201ENST00000570133 895 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MIR4448-201ENST00000584360 86 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 ZNF861P-201ENST00000588126 639 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC026634.1-201ENST00000634369 198 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MIR320B1-201ENST00000390209 79 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RPL31P52-201ENST00000407532 367 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC007677.1-201ENST00000445757 515 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 OR6K1P-201ENST00000456766 971 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AP000873.1-201ENST00000463987 400 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RN7SL622P-201ENST00000585292 275 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AP005137.2-201ENST00000609238 400 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MIR6873-201ENST00000622788 63 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MIR1291-201ENST00000627649 87 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 ANKRD62P1-201ENST00000434304 1623 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MTND2P2-201ENST00000434633 945 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 CTSLP2-204ENST00000629029 392 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC010680.1-201ENST00000590024 3590 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RPL9P7-201ENST00000330965 580 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MIR124-3-201ENST00000384866 87 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 MT-TP-201ENST00000387461 68 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AP002371.1-201ENST00000463604 433 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 ST13P14-201ENST00000474095 734 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC055876.1-202ENST00000567053 138 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 NF1P5-201ENST00000588287 448 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RPP40P2-201ENST00000603596 712 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 RMST_2.1-201ENST00000617263 136 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 AC000123.2-201ENST00000623124 461 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 SNORA50A-202ENST00000629536 136 ntBASIC0.77□□□□□ -2.29
SYNE1Q8NF91 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE1Q8NF91 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC006483.1-201ENST00000487308 313 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 RN7SL633P-201ENST00000488974 297 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 RNA5SP385-201ENST00000515947 110 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL355836.1-201ENST00000555951 870 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 U4.3-201ENST00000621047 82 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 PISRT1-201ENST00000626175 531 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms