Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC005868.1-201ENST00000536421 331 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC037471.2-201ENST00000564941 598 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC018552.3-201ENST00000567416 561 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC022432.1-201ENST00000595739 310 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC009318.4-201ENST00000620496 486 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC019206.1-201ENST00000621938 425 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC005858.4-201ENST00000623191 700 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 AC100810.6-201ENST00000638068 285 ntBASIC4.29□□□□□ -1.72
CPEB3Q8NE35 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CPEB3Q8NE35 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AL451142.2-201ENST00000429076 2090 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 MTND5P28-201ENST00000438005 1594 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 Y_RNA.234-201ENST00000364409 97 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 SNORA51.2-201ENST00000364595 132 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 RNU6-1207P-201ENST00000384343 107 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 MIR1-2-201ENST00000384961 85 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AL357515.1-201ENST00000402967 542 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 MIR1302-11-201ENST00000408051 138 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 MIR1302-9-201ENST00000408365 138 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 MIR1302-10-201ENST00000408734 138 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 RN7SKP125-201ENST00000410481 302 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC069218.2-201ENST00000411665 344 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 CHEK2P3-201ENST00000416118 248 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 BTF3P6-201ENST00000448054 499 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC140076.1-201ENST00000449897 361 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 RPL23AP56-201ENST00000460778 453 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 PLGLA-201ENST00000465668 449 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC233702.1-201ENST00000482905 502 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 RPL23AP41-201ENST00000484754 458 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC055855.1-201ENST00000489563 579 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC093767.1-201ENST00000504523 156 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC105029.1-201ENST00000520250 669 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AP001922.4-201ENST00000526967 290 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AP000907.2-201ENST00000530827 353 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 HMGB3P26-201ENST00000560051 582 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 OR1F2P-201ENST00000570470 933 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 MIR3146-201ENST00000580367 79 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 MIR1302-2-201ENST00000607096 138 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 PART1_1.1-201ENST00000611761 217 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 AC114546.3-201ENST00000623582 1734 ntBASIC4.28□□□□□ -1.72
CPEB3Q8NE35 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CPEB3Q8NE35 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.73
CPEB3Q8NE35 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CPEB3Q8NE35 AL445487.1-201ENST00000415694 1580 ntBASIC4.27□□□□□ -1.73
CPEB3Q8NE35 AC099654.2-201ENST00000433031 1980 ntBASIC4.27□□□□□ -1.73
CPEB3Q8NE35 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CPEB3Q8NE35 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.27□□□□□ -1.73
CPEB3Q8NE35 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.27□□□□□ -1.73
CPEB3Q8NE35 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CPEB3Q8NE35 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CPEB3Q8NE35 INTS6P1-201ENST00000504674 2530 ntBASIC4.27□□□□□ -1.73
CPEB3Q8NE35 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.27□□□□□ -1.73
CPEB3Q8NE35 AC105074.1-201ENST00000623380 3095 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms