Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL157831.1-201ENST00000426134 473 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 CYCSP43-201ENST00000438233 310 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 RPL22P17-201ENST00000438729 315 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AL031667.1-201ENST00000440222 725 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 ABCF2P2-201ENST00000450549 296 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC099563.1-201ENST00000456086 418 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 BTF3P5-201ENST00000457252 467 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 MTCO1P42-201ENST00000457379 726 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC126182.1-201ENST00000478134 357 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 RN7SL812P-201ENST00000493791 279 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC034222.1-201ENST00000494052 532 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 RNA5SP497-201ENST00000516081 97 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC120057.2-201ENST00000571520 271 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AL022154.1-201ENST00000604698 785 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC091965.4-201ENST00000607691 587 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 MIR8069-1-201ENST00000616627 86 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 MIR8069-2-201ENST00000621412 86 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC095031.1-201ENST00000623685 672 ntBASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMC1BQ8NDV3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 AC005832.2-201ENST00000538921 1430 ntBASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 AL450326.2-201ENST00000421913 1962 ntBASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 MTND5P26-201ENST00000426018 1752 ntBASIC5.15□□□□□ -1.58
SMC1BQ8NDV3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AL161781.1-201ENST00000354277 403 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 MIR183-201ENST00000384958 110 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 RNU11-4P-201ENST00000391149 133 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 SNORA68.2-201ENST00000391263 128 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 BTBD10P2-201ENST00000404779 676 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 Y_RNA.608-201ENST00000410647 95 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 RPS3AP3-201ENST00000411933 242 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 GLRXP1-201ENST00000423261 334 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 RPL30P3-201ENST00000424262 333 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC114495.1-201ENST00000441274 436 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AP000542.1-201ENST00000448473 371 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC005297.2-201ENST00000450430 606 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AL139099.1-201ENST00000497398 403 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC007566.2-201ENST00000603642 413 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC068944.2-201ENST00000610373 403 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC104010.1-201ENST00000616889 150 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC009237.17-201ENST00000618111 748 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC004009.2-201ENST00000623016 728 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 AC139713.2-215ENST00000641428 5037 ntBASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.15□□□□□ -1.59
SMC1BQ8NDV3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RNU6-28P-201ENST00000362378 107 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RNU6-744P-201ENST00000365557 107 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RNU6-1316P-201ENST00000384242 108 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AC012065.2-201ENST00000421295 375 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 EIF1P1-201ENST00000421436 341 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 RGS17P1-201ENST00000423358 553 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AL035410.1-201ENST00000427409 427 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 BX890604.2-201ENST00000427883 474 ntBASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.14□□□□□ -1.59
SMC1BQ8NDV3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms