Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MIR3939-201ENST00000582614 106 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 CCDC58P3-201ENST00000590792 430 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AL390838.2-201ENST00000602394 274 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC068831.7-201ENST00000616954 363 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC073348.1-201ENST00000623002 331 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC006963.1-201ENST00000624003 1052 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 NUP58P1-201ENST00000502546 1738 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 API5P2-201ENST00000397055 1498 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 MTCO1P23-201ENST00000415223 1526 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 RNU4-92P-201ENST00000363783 136 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 DYNLT3P1-201ENST00000378574 347 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 MIR513B-201ENST00000385136 84 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 U3.29-201ENST00000391296 212 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AL450338.1-201ENST00000407987 512 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 RNU4-65P-201ENST00000410473 140 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 RNA5SP293-201ENST00000410527 113 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AL356968.1-201ENST00000416622 474 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 NIPA2P1-201ENST00000426223 976 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC006548.1-201ENST00000427470 102 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 BX890604.2-201ENST00000427883 474 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC079780.1-201ENST00000428259 207 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 ISCA1P2-201ENST00000438679 421 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 CR769776.1-201ENST00000441254 787 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 RPL36AP33-201ENST00000450395 310 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 HMGB1P15-201ENST00000453854 435 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 RFC5P1-201ENST00000454419 874 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 UBDP1-202ENST00000457888 382 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC004062.1-201ENST00000509926 645 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 FTH1P21-201ENST00000512179 511 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC026412.2-201ENST00000512270 1075 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 MIR2276-201ENST00000516886 89 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 SNORA31.26-201ENST00000517250 137 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 HIGD1AP5-201ENST00000529959 259 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AL121603.1-201ENST00000553815 142 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AL132657.2-201ENST00000564417 358 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC012669.1-201ENST00000603209 283 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AL355812.1-201ENST00000603215 216 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC128687.1-201ENST00000605304 619 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC107294.3-201ENST00000609211 526 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC005332.6-201ENST00000613178 446 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC023158.2-201ENST00000614876 543 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 FP236240.3-201ENST00000623061 327 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC091925.2-201ENST00000625059 256 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 CR381572.1-201ENST00000625098 102 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 CYP3A51P-201ENST00000633513 256 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 U6.101-201ENST00000637707 76 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 AC107982.1-201ENST00000507171 1300 ntBASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC71LQ8N9Z2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 RNU6-560P-201ENST00000364007 108 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 U3.11-201ENST00000364476 212 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 Y_RNA.465-201ENST00000384293 102 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 AL590084.1-201ENST00000407885 387 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 Y_RNA.625-201ENST00000411256 107 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 RN7SKP53-201ENST00000411337 315 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 RAD23BP2-201ENST00000416003 1207 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 OR8F1P-201ENST00000425243 930 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 RPL18P10-201ENST00000425606 538 ntBASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71LQ8N9Z2 RPL23AP69-201ENST00000431134 458 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms