Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC093732.2-201ENST00000607950 274 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC016542.1-201ENST00000608259 493 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC096586.1-201ENST00000610267 561 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AL590240.3-201ENST00000621416 943 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 AC097372.4-201ENST00000625025 466 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 LRRC77P-213ENST00000637727 880 ntBASIC2.56□□□□□ -2
ZIC4Q8N9L1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZIC4Q8N9L1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZIC4Q8N9L1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZIC4Q8N9L1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZIC4Q8N9L1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.56□□□□□ -2
ZIC4Q8N9L1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZIC4Q8N9L1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 BMS1P22-201ENST00000414726 313 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZIC4Q8N9L1 RPL7P44-201ENST00000424827 742 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 RPS29P6-201ENST00000438196 145 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC092170.1-201ENST00000440211 356 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 RPL36AP33-201ENST00000450395 310 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 SETP6-201ENST00000479329 568 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AP004217.1-201ENST00000480579 346 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 MTND4LP22-201ENST00000508209 276 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 SCARNA13-201ENST00000516672 275 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 FAM60DP-201ENST00000524174 632 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC025588.3-201ENST00000604182 274 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AL451074.6-201ENST00000608512 729 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC021851.1-201ENST00000608537 1082 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC092650.2-201ENST00000619984 902 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC022509.4-201ENST00000621404 572 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 AC009039.2-201ENST00000624524 529 ntBASIC2.55□□□□□ -2
ZIC4Q8N9L1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZIC4Q8N9L1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.55□□□□□ -2
ZIC4Q8N9L1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZIC4Q8N9L1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.55□□□□□ -2
ZIC4Q8N9L1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZIC4Q8N9L1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 ZNF807-201ENST00000328088 1707 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZIC4Q8N9L1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC025263.3-201ENST00000622965 1396 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL645568.2-201ENST00000432815 1337 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 U8.9-201ENST00000365667 134 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 RNU6-796P-201ENST00000391086 107 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL591034.1-201ENST00000407447 340 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL139281.1-201ENST00000422120 335 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 MORF4L1P7-201ENST00000426038 703 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC006548.1-201ENST00000427470 102 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC093156.1-201ENST00000440382 670 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC112653.1-201ENST00000443851 386 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 OR5H5P-201ENST00000503164 928 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 MTCO3P44-201ENST00000510977 541 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC019227.1-201ENST00000526902 510 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC004217.3-201ENST00000551552 878 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL157394.1-201ENST00000562983 1224 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC055876.1-202ENST00000567053 138 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC006116.7-201ENST00000590141 756 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL451007.1-201ENST00000595491 289 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 BNIP3P4-201ENST00000604946 565 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC128687.1-201ENST00000605304 619 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC090115.4-201ENST00000609970 188 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL355493.4-201ENST00000618530 292 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC068722.2-201ENST00000618734 544 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AL163051.2-201ENST00000618976 735 ntBASIC2.54□□□□□ -2
ZIC4Q8N9L1 AC018755.4-201ENST00000619715 454 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms