Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 HSPE1P1-201ENST00000421494 318 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AL953862.1-201ENST00000423016 168 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 NANOGP5-201ENST00000424456 877 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 RPL21P40-201ENST00000428586 483 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 RPL26P6-201ENST00000440913 438 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 CDC27P1-201ENST00000445384 715 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC002381.1-201ENST00000447049 280 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 RPS23P7-201ENST00000466210 444 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC010618.1-201ENST00000469924 477 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 RNA5SP208-201ENST00000516156 78 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 RNA5SP164-201ENST00000516533 110 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 COX6CP8-201ENST00000522620 226 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC090695.1-201ENST00000561269 1222 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC89Q8N998 MIR4443-201ENST00000585052 53 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AP001429.1-201ENST00000602568 530 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AP000254.1-201ENST00000609934 520 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC245297.2-201ENST00000610119 565 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC112484.5-201ENST00000624189 228 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 OR6C71P-202ENST00000641886 1107 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC011460.1-201ENST00000636268 1834 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 AC093908.1-201ENST00000623125 8092 ntBASIC3.92□□□□□ -1.78
CCDC89Q8N998 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC89Q8N998 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC89Q8N998 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC89Q8N998 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 DDX43P2-201ENST00000604753 1354 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 RNU6-359P-201ENST00000365466 108 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AL391417.1-201ENST00000404100 426 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC009237.5-201ENST00000414271 501 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC106883.1-201ENST00000418805 562 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 NDUFB4P6-201ENST00000436819 366 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 MTND5P14-201ENST00000441481 1267 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 TXNP1-201ENST00000441872 371 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC006480.1-201ENST00000449887 378 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC104563.1-201ENST00000476147 376 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 RPL31P60-201ENST00000478450 367 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC108729.1-201ENST00000487812 947 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 RPS4XP15-201ENST00000489210 795 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC109464.2-201ENST00000510242 943 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 RAC1P2-201ENST00000511164 579 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC092593.2-201ENST00000513866 913 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 RNU6-714P-201ENST00000516963 103 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AL121576.1-201ENST00000556055 276 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC022662.1-201ENST00000580252 331 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AL353997.4-201ENST00000586196 166 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC106791.2-201ENST00000604680 391 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 MIR6867-201ENST00000610636 67 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC005962.2-201ENST00000611427 652 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 MIR6716-201ENST00000613413 80 ntBASIC3.91□□□□□ -1.78
CCDC89Q8N998 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC89Q8N998 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC89Q8N998 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC89Q8N998 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC89Q8N998 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 SNORA14A-201ENST00000364773 135 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 RNU6-76P-201ENST00000384060 104 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 BX842559.1-201ENST00000419615 532 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms