Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RAD23BP3-201ENST00000454157 1152 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC007967.1-201ENST00000455422 1159 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC013267.1-201ENST00000458227 267 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 RPL7P38-201ENST00000488396 739 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC023424.2-201ENST00000493479 777 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC048346.1-201ENST00000510247 144 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC022483.1-201ENST00000514020 567 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 RAB11AP2-201ENST00000545905 639 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC068993.1-201ENST00000546724 589 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC068714.1-201ENST00000559623 800 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC005730.3-201ENST00000583067 366 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AC115085.1-201ENST00000588924 229 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 AP005264.7-201ENST00000625003 745 ntBASIC4.92□□□□□ -1.62
SYNE4Q8N205 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNE4Q8N205 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNE4Q8N205 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNE4Q8N205 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNE4Q8N205 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 RNA5SP88-201ENST00000365560 109 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 Y_RNA.372-201ENST00000365599 102 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 RNU6-780P-201ENST00000391030 104 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 CCNG1P1-201ENST00000406783 885 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 RN7SKP56-201ENST00000410513 331 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 RNU2-41P-201ENST00000410991 178 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 MTCYBP24-201ENST00000420387 1106 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 OFD1P18Y-201ENST00000420889 959 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 USP12PX-201ENST00000432383 1057 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC244505.5-201ENST00000443639 207 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC011352.3-201ENST00000505162 593 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC074250.1-201ENST00000511117 192 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC091133.4-201ENST00000511142 308 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 IGKV2D-19-201ENST00000523346 262 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC087276.1-201ENST00000529659 480 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 PCMTD1P2-201ENST00000565017 355 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC022968.1-201ENST00000567372 442 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 MIR3124-201ENST00000582636 67 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 FGF7P1-201ENST00000582820 288 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 MIR3922-201ENST00000585192 84 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AL022154.1-201ENST00000604698 785 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC027807.2-201ENST00000616099 408 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 AC138649.3-201ENST00000622154 254 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNE4Q8N205 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SYNE4Q8N205 MTND4P23-201ENST00000447723 1363 ntBASIC4.91□□□□□ -1.62
SYNE4Q8N205 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNE4Q8N205 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNE4Q8N205 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SYNE4Q8N205 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNE4Q8N205 MFSD8-236ENST00000641509 4050 ntBASIC4.9□□□□□ -1.62
SYNE4Q8N205 AP001642.1-201ENST00000624727 2117 ntBASIC4.9□□□□□ -1.62
SYNE4Q8N205 AP002001.2-201ENST00000529025 1469 ntBASIC4.9□□□□□ -1.62
SYNE4Q8N205 RNU4-44P-201ENST00000363050 141 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 RNU5F-7P-201ENST00000363696 115 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 Y_RNA.450-201ENST00000384198 113 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 MIR1284-201ENST00000408337 120 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 OR51A5P-201ENST00000415429 942 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 GLRXP1-201ENST00000423261 334 ntBASIC4.9□□□□□ -1.63
SYNE4Q8N205 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.9□□□□□ -1.63
SYNE4Q8N205 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms