Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX5Q8N196 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX5Q8N196 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.91□□□□□ -1.46
SIX5Q8N196 PNPT1P2-201ENST00000456768 2050 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
SIX5Q8N196 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX5Q8N196 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX5Q8N196 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SIX5Q8N196 AL137003.2-201ENST00000606924 2538 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SIX5Q8N196 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SIX5Q8N196 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
SIX5Q8N196 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SIX5Q8N196 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SIX5Q8N196 AL159987.1-201ENST00000347911 293 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 RNA5SP131-201ENST00000365452 119 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 SMIM11P1-201ENST00000369586 178 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 Y_RNA.493-201ENST00000384422 102 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 RNU6-328P-201ENST00000390887 106 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 RPLP0P7-201ENST00000416050 667 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.9□□□□□ -1.46
SIX5Q8N196 AC018865.2-201ENST00000423631 129 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 RPL30P3-201ENST00000424262 333 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 MTCO3P45-201ENST00000443036 613 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 AL162389.1-201ENST00000449233 177 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 SDC4P-201ENST00000453285 601 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 RPS18P6-201ENST00000476880 458 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 RN7SL97P-201ENST00000486780 299 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX5Q8N196 AP002404.1-201ENST00000532005 451 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.9□□□□□ -1.46
SIX5Q8N196 AC090115.3-201ENST00000553218 849 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX5Q8N196 RPL23AP84-201ENST00000571193 464 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.9□□□□□ -1.46
SIX5Q8N196 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX5Q8N196 AC006157.1-201ENST00000611750 366 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 AC132068.1-201ENST00000623805 459 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 MIR4496-201ENST00000635896 61 ntBASIC5.9□□□□□ -1.46
SIX5Q8N196 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.9□□□□□ -1.47
SIX5Q8N196 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SIX5Q8N196 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.9□□□□□ -1.47
SIX5Q8N196 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SIX5Q8N196 AC093849.1-201ENST00000563631 2209 ntBASIC5.9□□□□□ -1.47
SIX5Q8N196 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SIX5Q8N196 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SIX5Q8N196 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX5Q8N196 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 AL359893.1-201ENST00000447628 1580 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 MTCO1P24-201ENST00000515438 1558 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AC011369.2-201ENST00000624423 1567 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
SIX5Q8N196 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 RNA5SP183-201ENST00000362452 119 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 RNU6-702P-201ENST00000364982 107 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 RNA5SP211-201ENST00000365516 117 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 RNU6-434P-201ENST00000384376 107 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 RNU6-393P-201ENST00000384475 107 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 Y_RNA.557-201ENST00000384680 107 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIX5Q8N196 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX5Q8N196 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.89□□□□□ -1.47
SIX5Q8N196 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX5Q8N196 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.89□□□□□ -1.47
SIX5Q8N196 AC002553.2-201ENST00000453217 340 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 RPS27AP3-201ENST00000453803 454 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AC112187.1-201ENST00000455837 479 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.89□□□□□ -1.47
SIX5Q8N196 RNU7-167P-201ENST00000459160 62 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 FTH1P2-201ENST00000466086 412 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AC104472.2-201ENST00000469035 601 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.89□□□□□ -1.47
SIX5Q8N196 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.89□□□□□ -1.47
SIX5Q8N196 SNORA14.1-201ENST00000516113 141 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 RNU6-794P-201ENST00000517261 64 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.89□□□□□ -1.47
SIX5Q8N196 AL161670.1-201ENST00000554348 137 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX5Q8N196 MIR4646-201ENST00000580775 63 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AL354984.3-201ENST00000604803 325 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AC007485.1-201ENST00000616755 206 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 AL162373.1-201ENST00000620433 407 ntBASIC5.89□□□□□ -1.47
SIX5Q8N196 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.89□□□□□ -1.47
SIX5Q8N196 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SIX5Q8N196 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX5Q8N196 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIX5Q8N196 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIX5Q8N196 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.88□□□□□ -1.47
SIX5Q8N196 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms