Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC116Q8IYX3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC144833.1-201ENST00000567953 4089 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AL606537.1-201ENST00000607258 2011 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 RNA5SP375-201ENST00000362975 119 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 snoU2_19.2-201ENST00000363024 80 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 FAM183DP-201ENST00000421987 399 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AL160275.3-201ENST00000423876 471 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 PTMAP6-201ENST00000439110 327 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 RPL29P29-201ENST00000448725 423 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC107393.1-201ENST00000512403 346 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC005798.1-201ENST00000513715 387 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 Y_RNA.683-201ENST00000516508 93 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 RNU6-677P-201ENST00000516914 101 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 Y_RNA.713-201ENST00000517013 96 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC011853.1-201ENST00000518911 454 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC087441.2-201ENST00000529141 262 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AMZ2P1-203ENST00000565833 850 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC008555.7-201ENST00000605008 583 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 CYP4F35P-202ENST00000636121 390 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 AC027228.2-201ENST00000567141 2154 ntBASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC116Q8IYX3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 RNU6-708P-201ENST00000384217 107 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 SNORA69.1-201ENST00000390904 137 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 MRPL35P1-201ENST00000404272 572 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 RNA5SP251-201ENST00000410614 137 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AL354707.3-201ENST00000427308 331 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC006946.1-201ENST00000429106 328 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 CEACAMP1-201ENST00000434624 1035 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC005165.2-201ENST00000466070 380 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 RPL12P30-201ENST00000488389 499 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 FTH1P24-201ENST00000503502 462 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC011411.1-201ENST00000509592 876 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC016065.2-201ENST00000514530 444 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 RN7SKP82-201ENST00000516786 223 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 IGLVIV-53-201ENST00000520107 367 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AP006587.4-201ENST00000526053 529 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 HIGD1AP5-201ENST00000529959 259 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC007494.1-201ENST00000562293 760 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 OR1F2P-201ENST00000570470 933 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 TXNP4-201ENST00000575018 310 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms