Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AL513174.1-201ENST00000423182 629 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 RPL23AP82-202ENST00000427528 469 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC092757.1-201ENST00000467293 467 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 PABPC1P3-201ENST00000469174 459 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 MTCO3P35-201ENST00000485582 781 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 OR5H5P-201ENST00000503164 928 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC010460.2-201ENST00000509054 677 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 APOOP4-201ENST00000513530 597 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 RNA5SP309-201ENST00000516670 106 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 RN7SKP116-201ENST00000516902 319 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AP001372.4-201ENST00000524889 472 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 TGIF1P1-201ENST00000558095 802 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC074050.1-201ENST00000563247 211 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC107954.1-201ENST00000565906 727 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 CCDC58P3-201ENST00000590792 430 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 BNIP3P26-201ENST00000600827 554 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 SRGNP1-201ENST00000603392 451 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC110801.1-201ENST00000623590 212 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 AC090897.3-201ENST00000636973 1157 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 U6.98-201ENST00000637157 84 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 ZNF37BP-203ENST00000452306 1352 ntBASIC3.1□□□□□ -1.91
C9orf40Q8IXQ3 CDR1-202ENST00000625883 1485 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-216P-201ENST00000363282 104 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 SNORD46.1-201ENST00000364139 104 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 RNA5SP267-201ENST00000364893 126 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-730P-201ENST00000383954 104 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 RNU6-339P-201ENST00000384310 107 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 MIR34B-201ENST00000385076 84 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC016769.3-201ENST00000396562 315 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AL592310.1-201ENST00000414330 671 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 SSR1P2-201ENST00000415208 787 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AL356968.1-201ENST00000416622 474 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AIMP1P1-201ENST00000418670 937 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC005300.1-201ENST00000428401 373 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 Z80107.1-201ENST00000436830 412 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 MTCO2P25-201ENST00000447065 681 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 VN1R10P-201ENST00000447106 875 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 PTENP1-201ENST00000447117 1215 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 CFTRP1-201ENST00000456646 183 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC091153.1-201ENST00000466297 402 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC108078.3-201ENST00000502633 489 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC093767.1-201ENST00000504523 156 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AGGF1P5-201ENST00000567900 919 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 MIR4760-201ENST00000585040 80 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC006254.3-201ENST00000603353 884 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AL159169.3-201ENST00000608871 561 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC107075.1-201ENST00000613695 314 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC073968.1-201ENST00000618594 637 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC018816.2-201ENST00000621460 353 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 AC120349.2-201ENST00000625002 298 ntBASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf40Q8IXQ3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
C9orf40Q8IXQ3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
C9orf40Q8IXQ3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
C9orf40Q8IXQ3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC017071.1-201ENST00000564407 2204 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms