Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AL121877.1-201ENST00000453704 622 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 HSPD1P15-201ENST00000505573 1122 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 MRPS33P2-201ENST00000507850 322 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 RNU6-277P-201ENST00000516272 106 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC103843.2-201ENST00000530523 682 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC079075.1-201ENST00000559543 878 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC007687.1-201ENST00000602704 304 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC004853.1-201ENST00000604902 698 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AL121992.2-201ENST00000606262 256 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC245517.5-201ENST00000611529 162 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AC093913.1-201ENST00000614178 329 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AL160413.1-201ENST00000622780 310 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 TPTEP1-208ENST00000636884 213 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 LINC01355-201ENST00000566551 5444 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MTND4P35-201ENST00000604257 1375 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 ASNSP3-201ENST00000451989 1306 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 Y_RNA.367-201ENST00000365544 101 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 UBBP2-201ENST00000376781 231 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MIR19A-201ENST00000384878 82 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MIR1302-11-201ENST00000408051 138 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 U3.32-201ENST00000408116 212 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MIR1302-9-201ENST00000408365 138 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MIR1302-10-201ENST00000408734 138 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 RN7SKP32-201ENST00000410167 303 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 Y_RNA.615-201ENST00000410769 117 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 RPS15AP40-201ENST00000419621 391 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AF228730.4-201ENST00000421457 183 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 DUTP6-201ENST00000425573 462 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC005534.2-201ENST00000431047 433 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC093414.1-201ENST00000434712 514 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 RPS20P5-201ENST00000434808 360 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 CYCSP24-201ENST00000445119 316 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 RPL7P19-201ENST00000469948 618 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 NARSP2-201ENST00000518524 679 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC128657.1-201ENST00000549459 145 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 SCOCP1-201ENST00000554676 349 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC006272.2-201ENST00000594725 163 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC020910.3-201ENST00000603701 874 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC113194.1-201ENST00000606037 500 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL133255.1-201ENST00000606374 441 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MIR1302-2-201ENST00000607096 138 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 PART1_1.1-201ENST00000611761 217 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL590099.1-201ENST00000615276 138 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AC126323.6-202ENST00000568092 3511 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL118496.1-201ENST00000440201 1812 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 AL645937.1-201ENST00000641739 1652 ntBASIC4.8□□□□□ -1.64
TRIM48Q8IWZ4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms