Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC007566.2-201ENST00000603642 413 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AL009028.1-201ENST00000604895 802 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC063944.3-201ENST00000609969 533 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC107075.1-201ENST00000613695 314 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 MIR8057-201ENST00000620957 69 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 MKKS-204ENST00000639674 192 ntBASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC60Q8IWA6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 MIR483-201ENST00000385070 76 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 TAF9BP1-201ENST00000396646 746 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AL023807.1-201ENST00000407932 359 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 RNA5SP80-201ENST00000410475 111 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 LUZP4P1-201ENST00000415420 344 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 USP9YP31-201ENST00000431405 881 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 TMED11P-201ENST00000479478 690 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 RNF138P1-201ENST00000502765 546 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 MTCYBP37-201ENST00000510642 1133 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 SNORA70.14-201ENST00000516205 110 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 RN7SKP116-201ENST00000516902 319 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC027309.2-201ENST00000520566 192 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC092470.1-201ENST00000546187 132 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC234772.3-201ENST00000602277 528 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC013244.3-201ENST00000605614 388 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC073657.2-201ENST00000605661 303 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 HMGN2P28-201ENST00000606102 262 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC091946.2-201ENST00000606105 291 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC007349.4-201ENST00000608114 532 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC005332.6-201ENST00000613178 446 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AL356321.1-201ENST00000621360 228 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC073348.1-201ENST00000623002 331 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 AC107982.1-201ENST00000507171 1300 ntBASIC3.69□□□□□ -1.82
CCDC60Q8IWA6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 GABPAP-201ENST00000419271 1356 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 Y_RNA.192-201ENST00000363977 102 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 RNU6-560P-201ENST00000364007 108 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 MTCO1P48-201ENST00000448024 1096 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 MTCO3P2-201ENST00000457365 171 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC004801.2-202ENST00000463559 283 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC110794.1-201ENST00000505816 425 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 USP9YP5-201ENST00000511770 630 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC023141.12-201ENST00000512399 199 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 RNU6-1261P-201ENST00000517194 104 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC107934.2-201ENST00000518653 310 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC005832.3-201ENST00000537929 631 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC090695.1-201ENST00000561269 1222 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 BNIP3P26-201ENST00000600827 554 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC113368.1-201ENST00000603736 382 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC025588.3-201ENST00000604182 274 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms