Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RNA5SP124-201ENST00000362739 110 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RNU6-1249P-201ENST00000363237 111 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 COX6CP18-201ENST00000448769 222 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC140076.1-201ENST00000449897 361 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RN7SL542P-201ENST00000467147 294 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC010301.1-201ENST00000473936 355 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 HMGN1P15-201ENST00000513870 295 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 snoZ278.1-201ENST00000517059 112 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RNU6-711P-201ENST00000517255 106 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC023632.1-201ENST00000518463 375 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC019227.1-201ENST00000526902 510 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AP003066.2-201ENST00000529375 555 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC044913.1-201ENST00000557200 430 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC012182.1-201ENST00000570133 895 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC006116.7-201ENST00000590141 756 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AL355812.1-201ENST00000603215 216 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC006329.2-201ENST00000611491 394 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 AC009318.4-201ENST00000620496 486 ntBASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUDCD3Q8IVD9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 SNORD82-201ENST00000365530 70 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC234772.1-201ENST00000377927 937 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 MIR217-201ENST00000384817 110 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 RNU6-821P-201ENST00000390995 107 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 RAB9AP3-201ENST00000412737 573 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AL133384.1-201ENST00000412744 351 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 RAD23BP2-201ENST00000416003 1207 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 BOLA3P4-201ENST00000418151 400 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC013262.1-201ENST00000426710 252 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AP000949.1-201ENST00000438328 629 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AL133547.1-201ENST00000448546 220 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 HMGN1P5-201ENST00000448591 263 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 RAB9AP1-201ENST00000449393 573 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC244505.3-201ENST00000454598 187 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC020898.1-201ENST00000474167 787 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC015908.1-201ENST00000478739 476 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 VPS26AP1-201ENST00000483197 979 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 ARL4AP2-201ENST00000507378 601 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC108043.1-201ENST00000512696 574 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 SNORD59.2-201ENST00000516873 68 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 OR8I1P-201ENST00000529291 931 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AP001317.1-201ENST00000531194 960 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC122134.1-202ENST00000569111 1201 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 SNORD84-203ENST00000584275 78 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC006130.2-201ENST00000586202 326 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 VN1R87P-201ENST00000596706 487 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 BDH2P1-201ENST00000602288 736 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC124312.4-201ENST00000605533 310 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC099785.1-201ENST00000605697 437 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AC009464.1-201ENST00000615731 469 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 AL512506.2-201ENST00000624472 458 ntBASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.06□□□□□ -1.92
NUDCD3Q8IVD9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 DBF4P1-201ENST00000412976 1892 ntBASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 AL645568.2-201ENST00000432815 1337 ntBASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 OR6K3-202ENST00000368146 996 ntBASIC3.05□□□□□ -1.92
NUDCD3Q8IVD9 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms