Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SNORA63C-201ENST00000364578 129 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 SNORD3H-201ENST00000384486 214 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 MIR124-3-201ENST00000384866 87 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AL606923.1-201ENST00000406616 190 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 ARL5AP1-201ENST00000418991 388 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC245028.1-201ENST00000423259 256 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 RPL34P6-201ENST00000432390 345 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AL359265.2-201ENST00000434367 631 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 BRK1P2-201ENST00000442875 223 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 CEACAMP10-202ENST00000495431 496 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 RNU7-30P-201ENST00000516835 62 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 SUB1P1-201ENST00000524415 382 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC009962.1-201ENST00000567327 3813 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AP001029.3-201ENST00000588063 596 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC012669.1-201ENST00000603209 283 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC106900.2-201ENST00000604994 317 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 uc_338.18-201ENST00000615451 175 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC243312.2-201ENST00000623340 601 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC138305.3-201ENST00000624988 240 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 IRF5P1-201ENST00000504852 2164 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 AL137003.2-201ENST00000606924 2538 ntBASIC5.63□□□□□ -1.51
NPAS4Q8IUM7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 XIAPP3-201ENST00000312918 795 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 Y_RNA.231-201ENST00000364358 102 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 U3.10-201ENST00000364459 214 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 RNVU1-6-201ENST00000364688 164 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 RNU6-510P-201ENST00000391239 108 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AL162578.1-201ENST00000406202 378 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 RN7SKP114-201ENST00000410327 279 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 RHOT1P3-201ENST00000436571 331 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 PRPF38AP2-201ENST00000438179 851 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC004866.2-201ENST00000438285 481 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 H2AFZP5-201ENST00000446960 382 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 RPS29P33-201ENST00000456717 146 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 RPL23AP11-201ENST00000475260 469 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC091885.1-201ENST00000506658 268 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC103851.1-201ENST00000506833 274 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 RN7SKP13-201ENST00000515933 244 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC021006.3-201ENST00000530771 192 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC093012.1-202ENST00000549403 582 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC007151.1-201ENST00000572774 483 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 MIR4775-201ENST00000581168 75 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC008814.1-201ENST00000603797 406 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AL139124.1-201ENST00000609123 421 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AL031658.2-201ENST00000616850 651 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC131238.1-201ENST00000617135 328 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 C2orf27A-204ENST00000623058 969 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 AC055839.1-201ENST00000634467 498 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 TPTEP1-208ENST00000636884 213 ntBASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPAS4Q8IUM7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms