Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 OR51AB1P-201ENST00000429046 620 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 PSMA2P3-201ENST00000429685 675 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 EXTL2P1-201ENST00000446218 416 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 BX248409.1-201ENST00000455497 255 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 SNORD109B-201ENST00000458961 67 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 SNORD109A-201ENST00000459128 67 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 RNU7-140P-201ENST00000459546 60 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 RNU4-29P-201ENST00000515943 174 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 RNU6-415P-201ENST00000516252 97 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 IGKV2D-23-201ENST00000518179 286 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AF279873.1-201ENST00000523393 313 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC079600.2-201ENST00000550076 130 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC069431.2-201ENST00000604149 1099 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 BNIP3P4-201ENST00000604946 565 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC026790.2-201ENST00000606282 430 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC018754.1-201ENST00000607486 925 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC022960.3-201ENST00000619794 441 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC091903.1-201ENST00000624322 454 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AL121594.5-201ENST00000631724 573 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 MIR4496-201ENST00000635896 61 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 AC099654.9-201ENST00000637055 678 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.07□□□□□ -1.76
NPHP3Q7Z494 MTCO1P14-201ENST00000441695 1559 ntBASIC4.07□□□□□ -1.76
NPHP3Q7Z494 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 XGY1-201ENST00000381172 446 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 RNU6-356P-201ENST00000384140 107 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AC092832.1-201ENST00000422934 400 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 OR4C2P-201ENST00000530855 1064 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 CENPUP2-201ENST00000555897 1186 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AC245884.10-201ENST00000597355 337 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AL022067.1-201ENST00000602426 454 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.06□□□□□ -1.76
NPHP3Q7Z494 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP3Q7Z494 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC107081.3-201ENST00000612715 2034 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 OR56A5-201ENST00000340110 738 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AL360182.1-201ENST00000397433 468 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 DSTNP4-201ENST00000399472 474 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC110754.1-201ENST00000399740 601 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 RNA5SP31-201ENST00000411144 127 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 TAF13P2-201ENST00000416876 286 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 RPL31P12-201ENST00000422587 358 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 MYL8P-204ENST00000431574 518 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 BX679664.1-201ENST00000434429 253 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 RPL23AP14-201ENST00000468281 468 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC128713.1-201ENST00000471495 306 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 PRELID3BP4-201ENST00000515476 571 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 RNU6-202P-201ENST00000515998 96 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 HMGB1P1-201ENST00000522557 636 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 OR5G4P-201ENST00000525251 760 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 ZNF971P-201ENST00000562068 1249 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 VN1R88P-201ENST00000596787 292 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC096947.1-201ENST00000603233 470 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC121761.2-201ENST00000617300 689 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AP003485.1-201ENST00000625093 753 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC243829.7-201ENST00000633081 225 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPHP3Q7Z494 PNPT1P2-201ENST00000456768 2050 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 AC073055.1-201ENST00000456901 1621 ntBASIC4.05□□□□□ -1.76
NPHP3Q7Z494 SAGE4P-201ENST00000442271 3381 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP3Q7Z494 MTCO1P6-201ENST00000481192 1384 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 RNU1-75P-201ENST00000347264 129 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 RNU6-353P-201ENST00000364266 108 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 SNORA70B-201ENST00000384210 135 ntBASIC4.04□□□□□ -1.76
NPHP3Q7Z494 BTBD10P2-201ENST00000404779 676 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms