Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 RN7SKP269-201ENST00000365545 319 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 SNORA70E-201ENST00000384492 135 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 CIR1P3-201ENST00000405137 479 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 RN7SKP267-201ENST00000410381 285 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 RNA5SP113-201ENST00000410486 84 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 COX6B1P1-201ENST00000415962 213 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC104850.1-201ENST00000435940 476 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 HLA-N-201ENST00000437516 135 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 CBX1P1-201ENST00000440184 427 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL359385.1-201ENST00000456509 365 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC063943.1-201ENST00000465434 453 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 OR5H5P-201ENST00000503164 928 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC114967.1-201ENST00000504890 259 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC093824.1-201ENST00000508796 343 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC009646.1-201ENST00000510455 318 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 SAP18P1-201ENST00000512058 390 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC010493.1-201ENST00000513479 292 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC010342.1-201ENST00000514047 877 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AP001893.2-201ENST00000526949 202 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 OR5BC1P-201ENST00000529327 739 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 BGLT3-201ENST00000564523 994 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC068135.2-201ENST00000569293 1028 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC121334.2-201ENST00000605387 271 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL391813.2-201ENST00000609113 322 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AL161734.1-201ENST00000609720 557 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 BX664608.1-201ENST00000610519 487 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 U6.42-201ENST00000618440 107 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 MIR3688-2-201ENST00000636963 87 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 AC025031.4-201ENST00000621248 3271 ntBASIC4.12□□□□□ -1.75
PTCHD4Q6ZW05 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 MTND5P33-201ENST00000571250 1450 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 ZNF734P-201ENST00000419494 1534 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL359893.1-201ENST00000447628 1580 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC008033.1-201ENST00000216407 1162 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.9-201ENST00000362354 101 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.450-201ENST00000384198 113 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 RNY3P14-201ENST00000384309 102 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 RNU6-780P-201ENST00000391030 104 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 U3.29-201ENST00000391296 212 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 RNU2-8P-201ENST00000410727 190 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC127391.1-201ENST00000411737 98 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC245052.5-201ENST00000416320 649 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 MTND3P17-201ENST00000416968 344 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AC140479.3-201ENST00000418944 1126 ntBASIC4.11□□□□□ -1.75
PTCHD4Q6ZW05 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms