Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 OR8R1P-201ENST00000543943 764 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 CYCSP2-201ENST00000558168 301 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC093227.2-201ENST00000589357 285 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 BNIP3P22-201ENST00000593399 556 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 RNU1-30P-201ENST00000606575 163 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 RNU6-88P-201ENST00000606801 100 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC007349.4-201ENST00000608114 532 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC027449.1-201ENST00000608890 407 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL390240.1-201ENST00000612950 384 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 ZYXP1-201ENST00000617638 118 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AC011330.2-201ENST00000621680 635 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 AL445264.1-201ENST00000621719 171 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 FP236240.3-201ENST00000623061 327 ntBASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NHLRC1Q6VVB1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
NHLRC1Q6VVB1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NHLRC1Q6VVB1 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.86
NHLRC1Q6VVB1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RPL7P26-201ENST00000333817 754 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AL136372.1-201ENST00000403060 228 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AL591034.1-201ENST00000407447 340 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RNU2-43P-201ENST00000410306 190 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC083875.1-201ENST00000419509 405 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC006960.1-201ENST00000419980 153 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AL606517.1-201ENST00000446914 387 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 MTND1P9-201ENST00000453775 944 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC017015.1-201ENST00000477387 286 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 TRBV12-2-201ENST00000489763 344 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RPL7P47-201ENST00000497299 556 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC004069.2-201ENST00000505438 1114 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 HMGB3P15-201ENST00000507326 574 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC024589.1-201ENST00000512207 263 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC022483.1-201ENST00000514020 567 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 OR6C7P-201ENST00000547875 934 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC087465.1-201ENST00000560574 245 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC053481.4-201ENST00000583164 216 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 VN1R85P-201ENST00000601587 426 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC015726.1-201ENST00000602353 681 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC013444.2-201ENST00000603317 787 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC067959.1-201ENST00000604334 379 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC009974.1-201ENST00000608881 455 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC034229.5-201ENST00000624258 185 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 U6.98-201ENST00000637157 84 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 MTND5P24-201ENST00000438892 1767 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 TAB3P1-202ENST00000452645 1634 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AC090740.1-201ENST00000623193 2262 ntBASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.4□□□□□ -1.87
NHLRC1Q6VVB1 AP000776.1-201ENST00000530032 1663 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 AC138915.3-201ENST00000562908 1389 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 MIR23B-201ENST00000384832 97 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 MIR591-201ENST00000385290 95 ntBASIC3.39□□□□□ -1.87
NHLRC1Q6VVB1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms