Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PDCL2P2-201ENST00000533651 189 ntBASIC3.57□□□□□ -1.84
CASC4Q6P4E1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AC021755.1-201ENST00000559747 1447 ntBASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 BNIP3P11-201ENST00000603878 563 ntBASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AL050303.3-201ENST00000613704 284 ntBASIC3.57□□□□□ -1.84
CASC4Q6P4E1 U4.6-201ENST00000621618 127 ntBASIC3.57□□□□□ -1.84
CASC4Q6P4E1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 AC090897.3-201ENST00000636973 1157 ntBASIC3.57□□□□□ -1.84
CASC4Q6P4E1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CASC4Q6P4E1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 MTND5P24-201ENST00000438892 1767 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC007823.1-201ENST00000569932 1566 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 FRG1CP-201ENST00000358464 769 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RNU1-64P-201ENST00000365443 163 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RN7SKP53-201ENST00000411337 315 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 SSR1P2-201ENST00000415208 787 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC245052.5-201ENST00000416320 649 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 TIMM9P2-201ENST00000419324 266 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC019178.2-201ENST00000423595 505 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC007742.1-201ENST00000425789 329 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 ELOCP26-201ENST00000436067 329 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AL606517.1-201ENST00000446914 387 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RPL26P28-201ENST00000451325 435 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 HMGB1P15-201ENST00000453854 435 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 SUMO2P2-201ENST00000456482 255 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 HMGN2P16-201ENST00000456802 261 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 USP9YP25-201ENST00000457708 443 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 U3.44-201ENST00000458938 192 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 MTND1P16-201ENST00000465177 898 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RN7SL594P-201ENST00000470590 287 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RPS4XP13-201ENST00000483219 789 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 WBP1LP4-201ENST00000505043 344 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RN7SKP60-201ENST00000516985 239 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 RANP9-201ENST00000519957 271 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 MTND2P32-201ENST00000521584 1038 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AP006245.1-201ENST00000522549 120 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 HSPA8P13-201ENST00000523715 472 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC090695.1-201ENST00000561269 1222 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 AL020997.2-201ENST00000602607 184 ntBASIC3.56□□□□□ -1.84
CASC4Q6P4E1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CASC4Q6P4E1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 SNORD9-201ENST00000362566 104 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 RNA5SP51-201ENST00000364750 119 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 Y_RNA.311-201ENST00000365068 96 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 SNORA72.3-201ENST00000365074 132 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 MIR591-201ENST00000385290 95 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 AC007066.1-201ENST00000392902 381 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 HMGB1P17-201ENST00000403495 628 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 RNU2-71P-201ENST00000411395 189 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 ELOCP9-201ENST00000418624 239 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 RPL7P30-201ENST00000420888 709 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 AL590233.1-201ENST00000430017 456 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 EZH2P1-201ENST00000431167 291 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 AC084290.1-201ENST00000434995 374 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 Z95327.1-201ENST00000446082 482 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 MRPS31P2-201ENST00000451581 518 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 RPL7P15-201ENST00000461190 712 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.55□□□□□ -1.84
CASC4Q6P4E1 AC020893.1-201ENST00000502452 580 ntBASIC3.55□□□□□ -1.84
CASC4Q6P4E1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms