Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC108667.1-201ENST00000428618 249 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AP003467.2-201ENST00000520175 319 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 HMGB1P41-201ENST00000520234 440 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC004486.1-201ENST00000546846 233 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC048351.1-201ENST00000420064 602 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC117522.2-201ENST00000510049 657 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 OR4U1P-201ENST00000554958 912 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC067852.7-201ENST00000623270 535 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 AC010680.1-201ENST00000590024 3590 ntBASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13DQ5THJ4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 RPL9P33-201ENST00000484311 566 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 GSTA12P-201ENST00000402398 508 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC098826.1-201ENST00000433943 471 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 RPL23AP44-201ENST00000482216 473 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AP003385.6-201ENST00000531603 374 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC011460.1-201ENST00000636268 1834 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC092326.2-201ENST00000624772 1561 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 SNORA26.7-201ENST00000391288 122 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 RPS24P8-201ENST00000431490 402 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 TRBV26-201ENST00000456572 344 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC012531.5-201ENST00000611375 151 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 U8.8-201ENST00000365399 135 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AC090819.1-201ENST00000523800 1111 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 TRAV37-201ENST00000553906 342 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 LRRC77P-213ENST00000637727 880 ntBASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13DQ5THJ4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 RNU2-17P-201ENST00000410290 190 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 SAR1AP4-201ENST00000429225 591 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 MOB1AP2-201ENST00000446060 614 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 CCNHP1-201ENST00000513311 678 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AC091488.1-201ENST00000604239 660 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AC025125.1-201ENST00000624743 1922 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AL645939.1-201ENST00000453429 797 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 RNA5SP385-201ENST00000515947 110 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AC110994.2-201ENST00000635481 492 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 RNU6-321P-201ENST00000410912 106 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 TAF9P1-201ENST00000445421 515 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 TAF9P2-201ENST00000454958 515 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AP005136.1-201ENST00000579765 429 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 snoU13.31-201ENST00000607291 104 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 BX664608.1-201ENST00000610519 487 ntBASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
VPS13DQ5THJ4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AL139276.1-201ENST00000311910 1001 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 SNORA79B-201ENST00000410557 148 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC104389.3-201ENST00000445629 235 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC006483.1-201ENST00000487308 313 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 snoZ278.1-201ENST00000517059 112 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC012119.1-201ENST00000603184 222 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms