Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AL731556.1-201ENST00000394628 3711 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 AC073365.1-203ENST00000641055 1992 ntBASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RNFT1Q5M7Z0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 EOGT-210ENST00000615922 1931 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC008725.1-201ENST00000605123 2263 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RN7SKP292-201ENST00000365522 317 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.568-201ENST00000384742 113 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC016769.2-201ENST00000414815 475 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RPL12P12-201ENST00000424633 501 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AP006222.1-205ENST00000450734 457 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RPS27AP3-201ENST00000453803 454 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RN7SL174P-201ENST00000475578 289 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC092865.4-201ENST00000477936 615 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RN7SL273P-201ENST00000481561 299 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC074133.1-201ENST00000515696 183 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RN7SKP96-201ENST00000516948 297 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RNA5SP400-201ENST00000517155 111 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 OR10G5P-201ENST00000532733 358 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC093023.1-201ENST00000547375 507 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 MIR4301-201ENST00000577203 66 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 MIR4293-201ENST00000584305 78 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC011445.2-201ENST00000599274 173 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 AC097063.1-201ENST00000426714 1797 ntBASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.5□□□□□ -1.53
RNFT1Q5M7Z0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 RNU105B-201ENST00000364478 208 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.441-201ENST00000384123 112 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 Y_RNA.580-201ENST00000391004 95 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 RNA5SP107-201ENST00000411358 122 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AL035660.1-201ENST00000422041 222 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AC245884.2-201ENST00000426257 404 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 MTND3P9-201ENST00000429526 346 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AL162725.1-201ENST00000435405 301 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AC005094.1-201ENST00000440420 368 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AL161636.2-201ENST00000445179 927 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 NXT1P1-201ENST00000458481 316 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 RPL21P103-201ENST00000479921 488 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AC140059.1-201ENST00000489238 361 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 RPS17P5-201ENST00000498293 408 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 RPS4XP20-201ENST00000505751 772 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 ACA59.1-201ENST00000515966 143 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AC109479.2-201ENST00000517842 174 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 IGHV1-14-201ENST00000523391 241 ntBASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.49□□□□□ -1.53
RNFT1Q5M7Z0 AL358913.1-201ENST00000554342 121 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms