Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC012671.1-201ENST00000451912 203 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 MTCO1P42-201ENST00000457379 726 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 RN7SL542P-201ENST00000467147 294 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC087312.1-201ENST00000471411 480 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 RPS4XP18-201ENST00000495480 763 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC116353.2-201ENST00000505332 712 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC022447.3-201ENST00000506865 495 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC093677.1-201ENST00000514414 678 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AP002453.2-201ENST00000533503 320 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 OR6C73P-201ENST00000546432 358 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL161713.1-201ENST00000555538 145 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC053481.3-201ENST00000577881 843 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 MIR4444-1-201ENST00000581696 74 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 MIR4444-2-201ENST00000584390 74 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 RPL23AP92-201ENST00000603609 255 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 SEPT7P9-203ENST00000604116 343 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AC138932.5-201ENST00000617759 563 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 AL158163.1-201ENST00000603915 1649 ntBASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SLC44A4Q53GD3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 RNY4P24-201ENST00000362735 96 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 RNU6-744P-201ENST00000365557 107 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 MIR3065-201ENST00000390137 79 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 MIR1305-201ENST00000408300 86 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 MTATP6P27-201ENST00000416987 621 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC012065.2-201ENST00000421295 375 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AL513174.1-201ENST00000423182 629 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC007742.1-201ENST00000425789 329 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 ELOCP26-201ENST00000436067 329 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 RPL7P36-201ENST00000444633 681 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AL671855.1-201ENST00000446875 1203 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 NANOGNBP1-201ENST00000448444 480 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 RPL7P31-201ENST00000450192 724 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 snoU13.22-201ENST00000459428 104 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 MTCO3P38-201ENST00000468910 766 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC126182.1-201ENST00000478134 357 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC023424.2-201ENST00000493479 777 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 OR5BC1P-201ENST00000529327 739 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 HMGB3P26-201ENST00000560051 582 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC098614.4-201ENST00000607601 462 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC006566.1-201ENST00000608943 513 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 MIR7154-201ENST00000620673 73 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 AC140479.6-201ENST00000633535 357 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 NUP58P1-201ENST00000502546 1738 ntBASIC4.55□□□□□ -1.68
SLC44A4Q53GD3 CR848007.1-201ENST00000442354 1699 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 LINC00622-201ENST00000562811 1570 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 RNU6-28P-201ENST00000362378 107 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 Y_RNA.88-201ENST00000363029 99 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 RNU6-533P-201ENST00000384144 107 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 RNU6-297P-201ENST00000384636 107 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MTCO1P17-201ENST00000411522 491 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 HMGN1P14-201ENST00000412459 517 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AL139095.3-201ENST00000419672 1203 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 MTCO2P5-201ENST00000422621 426 ntBASIC4.54□□□□□ -1.68
SLC44A4Q53GD3 AC109583.1-201ENST00000432156 268 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms