Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC073508.1-201ENST00000428866 656 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 UBE2V1P1-201ENST00000430836 445 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 HMGB1P5-202ENST00000451497 985 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 MRPL42P6-201ENST00000486397 371 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 IGKV2-36-201ENST00000519999 223 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 MTCO1P47-201ENST00000523889 1271 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 CCNG2P1-201ENST00000549521 1000 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 MIR4635-201ENST00000583759 79 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC092474.3-201ENST00000603022 568 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC009570.1-201ENST00000609599 745 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 MIR203B-201ENST00000636080 86 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 SNORA38.1-201ENST00000364172 131 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AL138885.1-201ENST00000405921 675 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 RPL21P32-201ENST00000419877 477 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 MORF4L1P7-201ENST00000426038 703 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 UBE2V2P4-201ENST00000447495 259 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AC090096.1-201ENST00000489168 390 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 ACTR6P1-201ENST00000514311 1104 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AC034105.4-201ENST00000568304 277 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 MIR3158-1-201ENST00000583596 81 ntBASIC2.34□□□□□ -2.03
CCDC58Q4VC31 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC58Q4VC31 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC58Q4VC31 ZNF519P1-201ENST00000449011 1626 ntBASIC2.34□□□□□ -2.04
CCDC58Q4VC31 AC087565.3-202ENST00000642085 1603 ntBASIC2.34□□□□□ -2.04
CCDC58Q4VC31 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC58Q4VC31 AC022031.1-201ENST00000585985 2593 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 MIR422A-201ENST00000362286 90 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 SET-203ENST00000372688 801 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 MIR524-201ENST00000385242 87 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 MIR134-201ENST00000385258 73 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 SNORA11C-201ENST00000408532 129 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 RNA5SP21-201ENST00000410917 96 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 RPL34P26-201ENST00000445636 354 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC114322.1-201ENST00000506771 926 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC113155.1-201ENST00000511141 769 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 RNU6-1308P-201ENST00000516817 103 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC007954.1-201ENST00000554198 494 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 MIR548Y-201ENST00000582739 110 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC008739.3-201ENST00000603262 127 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AL138880.2-201ENST00000616214 239 ntBASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC58Q4VC31 AC012321.1-201ENST00000561622 1588 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 MIR7-3-201ENST00000384898 110 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AL138827.1-201ENST00000402666 306 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 FAT1P1-201ENST00000406588 507 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 RPL26P37-201ENST00000411983 438 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AF274854.1-201ENST00000413236 615 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 MTCO3P4-201ENST00000419236 787 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms