Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.97□□□□□ -1.93
RFX7Q2KHR2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
RFX7Q2KHR2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.96□□□□□ -1.93
RFX7Q2KHR2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 SNORA41-201ENST00000384675 132 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 EI24P1-201ENST00000416584 867 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 SETP8-201ENST00000435341 628 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AC093392.2-201ENST00000450682 337 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AP000705.1-201ENST00000454567 350 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 RPL23AP45-201ENST00000476406 468 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 ATG10-AS1-201ENST00000504846 648 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AP002770.2-201ENST00000543613 532 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 RPL23AP84-201ENST00000571193 464 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX7Q2KHR2 AL450472.3-201ENST00000615578 367 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 MIR1291-201ENST00000627649 87 ntBASIC2.96□□□□□ -1.94
RFX7Q2KHR2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 RNVU1-3-201ENST00000364313 161 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 RN7SKP223-201ENST00000410582 62 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AL158825.1-201ENST00000414735 521 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AC233981.1-201ENST00000423224 461 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 RPS15AP1-201ENST00000457423 391 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 HMGB3P15-201ENST00000507326 574 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 RNU4-60P-201ENST00000517239 135 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 OR6C73P-201ENST00000546432 358 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 MIR3690-201ENST00000580266 75 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 VN1R7P-201ENST00000619242 903 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AC006065.5-201ENST00000623427 349 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 MTND5P3-201ENST00000438536 1800 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 AC011978.2-201ENST00000569835 2054 ntBASIC2.95□□□□□ -1.94
RFX7Q2KHR2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX7Q2KHR2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AL354719.1-201ENST00000406535 843 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 RN7SKP192-201ENST00000411291 327 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 NANOGP5-201ENST00000424456 877 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 EEF1A1P37-201ENST00000522748 715 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AP000916.1-201ENST00000533869 835 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AP000873.5-201ENST00000533906 236 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AC004486.1-201ENST00000546846 233 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 YWHAQP7-201ENST00000603536 658 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AC098826.3-201ENST00000603823 466 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.94□□□□□ -1.94
RFX7Q2KHR2 AC010809.3-201ENST00000621310 641 ntBASIC2.94□□□□□ -1.94
RFX7Q2KHR2 FRG1BP-201ENST00000278882 761 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFX7Q2KHR2 FAT1P1-201ENST00000406588 507 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 RNU4-53P-201ENST00000410828 140 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 BX276092.3-201ENST00000424182 230 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 MTCO1P39-201ENST00000426148 480 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 HMGN2P16-201ENST00000456802 261 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 RPS26P21-201ENST00000475397 348 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 AP003467.2-201ENST00000520175 319 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.93□□□□□ -1.94
RFX7Q2KHR2 AP006437.1-201ENST00000641440 3685 ntBASIC2.93□□□□□ -1.94
RFX7Q2KHR2 AC096656.1-201ENST00000623826 1364 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 RPS3AP26-201ENST00000398259 784 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 HMGB1P45-201ENST00000435986 653 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 RPL21P2-201ENST00000440049 481 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AC104389.3-201ENST00000445629 235 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 snoU13.15-201ENST00000459407 104 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AC008571.1-201ENST00000467232 300 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 SNORA31.1-201ENST00000515993 133 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 SNORA31.5-201ENST00000516190 133 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms